Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.51■□□□□ 0.39
GABREP78334 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GABREP78334 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABREP78334 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABREP78334 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABREP78334 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABREP78334 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
GABREP78334 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABREP78334 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GABREP78334 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.51■□□□□ 0.39
GABREP78334 MIR1233-2-201ENST00000408138 82 ntBASIC17.51■□□□□ 0.39
GABREP78334 MIR1233-1-201ENST00000408722 82 ntBASIC17.51■□□□□ 0.39
GABREP78334 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.51■□□□□ 0.39
GABREP78334 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.51■□□□□ 0.39
GABREP78334 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.51■□□□□ 0.39
GABREP78334 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GABREP78334 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GABREP78334 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.51■□□□□ 0.39
GABREP78334 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GABREP78334 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABREP78334 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GABREP78334 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
GABREP78334 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABREP78334 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
GABREP78334 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.51■□□□□ 0.39
GABREP78334 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABREP78334 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABREP78334 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
GABREP78334 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.5■□□□□ 0.39
GABREP78334 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GABREP78334 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABREP78334 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABREP78334 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.5■□□□□ 0.39
GABREP78334 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GABREP78334 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABREP78334 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
GABREP78334 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.5■□□□□ 0.39
GABREP78334 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.5■□□□□ 0.39
GABREP78334 AC096582.2-201ENST00000510860 516 ntBASIC17.5■□□□□ 0.39
GABREP78334 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.5■□□□□ 0.39
GABREP78334 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.5■□□□□ 0.39
GABREP78334 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.5■□□□□ 0.39
GABREP78334 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABREP78334 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABREP78334 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABREP78334 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.5■□□□□ 0.39
GABREP78334 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABREP78334 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABREP78334 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.5■□□□□ 0.39
GABREP78334 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.5■□□□□ 0.39
GABREP78334 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.5■□□□□ 0.39
GABREP78334 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABREP78334 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.5■□□□□ 0.39
GABREP78334 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABREP78334 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABREP78334 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.5■□□□□ 0.39
GABREP78334 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GABREP78334 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.49■□□□□ 0.39
GABREP78334 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
GABREP78334 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABREP78334 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABREP78334 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABREP78334 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GABREP78334 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABREP78334 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.49■□□□□ 0.39
GABREP78334 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.49■□□□□ 0.39
GABREP78334 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABREP78334 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABREP78334 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GABREP78334 POLD2P1-201ENST00000511220 997 ntBASIC17.49■□□□□ 0.39
GABREP78334 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GABREP78334 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.49■□□□□ 0.39
GABREP78334 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.49■□□□□ 0.39
GABREP78334 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.49■□□□□ 0.39
GABREP78334 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABREP78334 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
GABREP78334 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABREP78334 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
GABREP78334 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
GABREP78334 KRT89P-201ENST00000620027 1478 ntBASIC17.49■□□□□ 0.39
GABREP78334 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GABREP78334 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABREP78334 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.49■□□□□ 0.39
GABREP78334 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
GABREP78334 AC125437.2-201ENST00000625180 2167 ntBASIC17.49■□□□□ 0.39
GABREP78334 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GABREP78334 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABREP78334 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GABREP78334 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.48■□□□□ 0.39
GABREP78334 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GABREP78334 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.48■□□□□ 0.39
GABREP78334 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms