Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP4BP1P59074 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.05■□□□□ 0.96
CHMP4BP1P59074 AL645929.1-201ENST00000420084 975 ntBASIC21.05■□□□□ 0.96
CHMP4BP1P59074 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP4BP1P59074 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.05■□□□□ 0.96
CHMP4BP1P59074 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.05■□□□□ 0.96
CHMP4BP1P59074 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.05■□□□□ 0.96
CHMP4BP1P59074 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP4BP1P59074 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP4BP1P59074 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.05■□□□□ 0.96
CHMP4BP1P59074 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CHMP4BP1P59074 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CHMP4BP1P59074 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP4BP1P59074 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CHMP4BP1P59074 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CHMP4BP1P59074 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 HBZP1-201ENST00000354915 429 ntBASIC21.04■□□□□ 0.96
CHMP4BP1P59074 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 SPDYE13P-201ENST00000445314 798 ntBASIC21.04■□□□□ 0.96
CHMP4BP1P59074 MCCD1P1-208ENST00000445732 328 ntBASIC21.04■□□□□ 0.96
CHMP4BP1P59074 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP4BP1P59074 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
CHMP4BP1P59074 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.02■□□□□ 0.96
CHMP4BP1P59074 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP4BP1P59074 AC020763.4-201ENST00000623414 4170 ntBASIC21.02■□□□□ 0.96
CHMP4BP1P59074 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHMP4BP1P59074 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHMP4BP1P59074 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHMP4BP1P59074 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHMP4BP1P59074 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.02■□□□□ 0.95
CHMP4BP1P59074 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHMP4BP1P59074 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms