Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL512604.3-201ENST00000569583 964 ntBASIC16.91■□□□□ 0.3
CLDN20P56880 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN20P56880 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN20P56880 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.91■□□□□ 0.3
CLDN20P56880 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 AC006011.2-201ENST00000621313 1158 ntBASIC16.91■□□□□ 0.3
CLDN20P56880 CR769767.2-201ENST00000622735 460 ntBASIC16.91■□□□□ 0.3
CLDN20P56880 AC141257.4-201ENST00000634557 245 ntBASIC16.91■□□□□ 0.3
CLDN20P56880 AC136944.6-201ENST00000634818 245 ntBASIC16.91■□□□□ 0.3
CLDN20P56880 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN20P56880 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLDN20P56880 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN20P56880 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLDN20P56880 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN20P56880 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 AC006333.2-201ENST00000607957 2099 ntBASIC16.9■□□□□ 0.3
CLDN20P56880 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.9■□□□□ 0.3
CLDN20P56880 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CLDN20P56880 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN20P56880 BX664615.1-201ENST00000443558 458 ntBASIC16.9■□□□□ 0.3
CLDN20P56880 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 MCCD1P1-208ENST00000445732 328 ntBASIC16.9■□□□□ 0.3
CLDN20P56880 AC104076.2-201ENST00000448912 469 ntBASIC16.9■□□□□ 0.3
CLDN20P56880 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN20P56880 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN20P56880 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN20P56880 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN20P56880 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CLDN20P56880 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN20P56880 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN20P56880 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CLDN20P56880 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN20P56880 AC036111.1-201ENST00000533973 1582 ntBASIC16.89■□□□□ 0.3
CLDN20P56880 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN20P56880 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CLDN20P56880 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN20P56880 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN20P56880 KRT8P32-201ENST00000512863 1461 ntBASIC16.89■□□□□ 0.29
CLDN20P56880 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.89■□□□□ 0.29
CLDN20P56880 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN20P56880 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.89■□□□□ 0.29
CLDN20P56880 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN20P56880 AC139887.4-201ENST00000607877 719 ntBASIC16.89■□□□□ 0.29
CLDN20P56880 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CLDN20P56880 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN20P56880 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN20P56880 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN20P56880 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CLDN20P56880 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN20P56880 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN20P56880 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN20P56880 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN20P56880 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms