Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLDN12P56749 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN12P56749 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN12P56749 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLDN12P56749 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLDN12P56749 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLDN12P56749 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLDN12P56749 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN12P56749 KRT8P45-201ENST00000414328 1447 ntBASIC16.06■□□□□ 0.16
CLDN12P56749 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.06■□□□□ 0.16
CLDN12P56749 GUSBP6-202ENST00000438529 1198 ntBASIC16.06■□□□□ 0.16
CLDN12P56749 AC006970.2-201ENST00000450065 779 ntBASIC16.06■□□□□ 0.16
CLDN12P56749 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN12P56749 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CLDN12P56749 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.06■□□□□ 0.16
CLDN12P56749 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
CLDN12P56749 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN12P56749 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN12P56749 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN12P56749 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN12P56749 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN12P56749 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.05■□□□□ 0.16
CLDN12P56749 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CLDN12P56749 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
CLDN12P56749 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN12P56749 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN12P56749 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN12P56749 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN12P56749 MIR4758-201ENST00000577688 71 ntBASIC16.05■□□□□ 0.16
CLDN12P56749 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN12P56749 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.05■□□□□ 0.16
CLDN12P56749 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 AL645608.8-201ENST00000606034 2086 ntBASIC16.05■□□□□ 0.16
CLDN12P56749 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN12P56749 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN12P56749 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLDN12P56749 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN12P56749 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN12P56749 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN12P56749 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN12P56749 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CLDN12P56749 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN12P56749 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 NBPF21P-201ENST00000425093 1451 ntBASIC16.04■□□□□ 0.16
CLDN12P56749 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN12P56749 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN12P56749 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN12P56749 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 SLC25A6P5-201ENST00000435663 894 ntBASIC16.04■□□□□ 0.16
CLDN12P56749 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLDN12P56749 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN12P56749 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN12P56749 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN12P56749 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CLDN12P56749 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 AC083880.1-201ENST00000608266 535 ntBASIC16.04■□□□□ 0.16
CLDN12P56749 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms