Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH4P55283 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH4P55283 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.82■□□□□ 0.6
CDH4P55283 AL138781.2-201ENST00000617896 1843 ntBASIC18.82■□□□□ 0.6
CDH4P55283 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH4P55283 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.82■□□□□ 0.6
CDH4P55283 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH4P55283 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH4P55283 KRT18P48-201ENST00000434763 852 ntBASIC18.82■□□□□ 0.6
CDH4P55283 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.82■□□□□ 0.6
CDH4P55283 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH4P55283 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH4P55283 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.82■□□□□ 0.6
CDH4P55283 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH4P55283 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH4P55283 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH4P55283 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH4P55283 KRT89P-201ENST00000620027 1478 ntBASIC18.82■□□□□ 0.6
CDH4P55283 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH4P55283 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 AC005082.1-201ENST00000413042 2259 ntBASIC18.81■□□□□ 0.6
CDH4P55283 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDH4P55283 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDH4P55283 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CDH4P55283 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH4P55283 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CDH4P55283 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH4P55283 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDH4P55283 AC008687.5-201ENST00000593746 558 ntBASIC18.81■□□□□ 0.6
CDH4P55283 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH4P55283 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH4P55283 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH4P55283 AC099343.3-201ENST00000605834 2503 ntBASIC18.81■□□□□ 0.6
CDH4P55283 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CDH4P55283 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH4P55283 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH4P55283 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CDH4P55283 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH4P55283 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH4P55283 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDH4P55283 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.8■□□□□ 0.6
CDH4P55283 WIZP1-201ENST00000531444 2299 ntBASIC18.8■□□□□ 0.6
CDH4P55283 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH4P55283 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH4P55283 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH4P55283 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CDH4P55283 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDH4P55283 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDH4P55283 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH4P55283 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH4P55283 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH4P55283 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH4P55283 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH4P55283 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.8■□□□□ 0.6
CDH4P55283 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.8■□□□□ 0.6
CDH4P55283 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDH4P55283 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.8■□□□□ 0.6
CDH4P55283 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH4P55283 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH4P55283 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH4P55283 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH4P55283 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH4P55283 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH4P55283 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH4P55283 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH4P55283 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH4P55283 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.79■□□□□ 0.6
CDH4P55283 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
CDH4P55283 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.79■□□□□ 0.6
CDH4P55283 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH4P55283 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.79■□□□□ 0.6
CDH4P55283 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 AP003733.1-201ENST00000491725 852 ntBASIC18.79■□□□□ 0.6
CDH4P55283 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.79■□□□□ 0.6
CDH4P55283 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms