Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC25A1P53007 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC25A1P53007 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC25A1P53007 AL163051.1-201ENST00000569214 1512 ntBASIC16.4■□□□□ 0.22
SLC25A1P53007 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.39■□□□□ 0.22
SLC25A1P53007 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SLC25A1P53007 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SLC25A1P53007 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SLC25A1P53007 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC25A1P53007 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC25A1P53007 AC036111.1-201ENST00000533973 1582 ntBASIC16.39■□□□□ 0.21
SLC25A1P53007 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 PHGDH-209ENST00000641074 1780 ntBASIC16.39■□□□□ 0.21
SLC25A1P53007 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC25A1P53007 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC25A1P53007 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC25A1P53007 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC25A1P53007 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC25A1P53007 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.39■□□□□ 0.21
SLC25A1P53007 MIR149-201ENST00000384879 89 ntBASIC16.39■□□□□ 0.21
SLC25A1P53007 RPS2P55-201ENST00000397318 883 ntBASIC16.39■□□□□ 0.21
SLC25A1P53007 AC012618.2-201ENST00000428058 849 ntBASIC16.39■□□□□ 0.21
SLC25A1P53007 AC107956.1-201ENST00000494359 873 ntBASIC16.39■□□□□ 0.21
SLC25A1P53007 MIR4674-201ENST00000582457 87 ntBASIC16.39■□□□□ 0.21
SLC25A1P53007 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC25A1P53007 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC25A1P53007 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC25A1P53007 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 AP000997.3-201ENST00000623333 2250 ntBASIC16.39■□□□□ 0.21
SLC25A1P53007 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.39■□□□□ 0.21
SLC25A1P53007 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 AC090340.1-201ENST00000620778 4980 ntBASIC16.39■□□□□ 0.21
SLC25A1P53007 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC25A1P53007 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC25A1P53007 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC25A1P53007 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 KRT8P7-201ENST00000533003 1432 ntBASIC16.38■□□□□ 0.21
SLC25A1P53007 HOXB1-202ENST00000577092 1414 ntBASIC16.38■□□□□ 0.21
SLC25A1P53007 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 AC009102.3-201ENST00000623118 1491 ntBASIC16.38■□□□□ 0.21
SLC25A1P53007 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SLC25A1P53007 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SLC25A1P53007 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SLC25A1P53007 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC25A1P53007 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC25A1P53007 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC25A1P53007 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC25A1P53007 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
SLC25A1P53007 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.38■□□□□ 0.21
SLC25A1P53007 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC25A1P53007 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SLC25A1P53007 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC25A1P53007 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SLC25A1P53007 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SLC25A1P53007 AC134043.2-201ENST00000624206 2238 ntBASIC16.38■□□□□ 0.21
SLC25A1P53007 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SLC25A1P53007 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SLC25A1P53007 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
SLC25A1P53007 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SLC25A1P53007 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC25A1P53007 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SLC25A1P53007 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC25A1P53007 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC25A1P53007 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC25A1P53007 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SLC25A1P53007 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC25A1P53007 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC25A1P53007 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms