Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF140P52738 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF140P52738 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF140P52738 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
ZNF140P52738 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ZNF140P52738 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF140P52738 AL441883.1-201ENST00000566170 1045 ntBASIC18.36■□□□□ 0.53
ZNF140P52738 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF140P52738 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF140P52738 ABALON-201ENST00000629058 1903 ntBASIC18.36■□□□□ 0.53
ZNF140P52738 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF140P52738 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF140P52738 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF140P52738 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF140P52738 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF140P52738 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF140P52738 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF140P52738 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF140P52738 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF140P52738 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF140P52738 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF140P52738 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ZNF140P52738 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF140P52738 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ZNF140P52738 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF140P52738 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF140P52738 BX664615.1-201ENST00000443558 458 ntBASIC18.35■□□□□ 0.53
ZNF140P52738 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF140P52738 AL157888.1-201ENST00000631930 593 ntBASIC18.35■□□□□ 0.53
ZNF140P52738 AL390961.4-201ENST00000623958 2535 ntBASIC18.35■□□□□ 0.53
ZNF140P52738 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF140P52738 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF140P52738 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF140P52738 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ZNF140P52738 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF140P52738 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF140P52738 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF140P52738 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF140P52738 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ZNF140P52738 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ZNF140P52738 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ZNF140P52738 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ZNF140P52738 AC117947.1-201ENST00000427448 529 ntBASIC18.34■□□□□ 0.53
ZNF140P52738 YBX1P2-201ENST00000489612 999 ntBASIC18.34■□□□□ 0.53
ZNF140P52738 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.34■□□□□ 0.53
ZNF140P52738 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
ZNF140P52738 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF140P52738 AC139887.4-201ENST00000607877 719 ntBASIC18.34■□□□□ 0.53
ZNF140P52738 AL024508.2-201ENST00000607749 1894 ntBASIC18.34■□□□□ 0.53
ZNF140P52738 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZNF140P52738 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF140P52738 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZNF140P52738 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ZNF140P52738 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF140P52738 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF140P52738 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
ZNF140P52738 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.33■□□□□ 0.53
ZNF140P52738 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
ZNF140P52738 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNF140P52738 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF140P52738 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.33■□□□□ 0.52
ZNF140P52738 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.33■□□□□ 0.52
ZNF140P52738 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF140P52738 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.33■□□□□ 0.52
ZNF140P52738 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF140P52738 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF140P52738 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ZNF140P52738 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.33■□□□□ 0.52
ZNF140P52738 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNF140P52738 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.33■□□□□ 0.52
ZNF140P52738 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNF140P52738 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNF140P52738 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNF140P52738 AC006011.2-201ENST00000621313 1158 ntBASIC18.33■□□□□ 0.52
ZNF140P52738 AC011558.1-201ENST00000623459 338 ntBASIC18.33■□□□□ 0.52
ZNF140P52738 AL031432.5-201ENST00000641059 760 ntBASIC18.33■□□□□ 0.52
ZNF140P52738 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF140P52738 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF140P52738 AIRN-201ENST00000601203 4374 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms