Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDR1P51861 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDR1P51861 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDR1P51861 AC020916.1-201ENST00000587762 1774 ntBASIC20.18■□□□□ 0.82
CDR1P51861 AL032819.2-201ENST00000624543 2162 ntBASIC20.18■□□□□ 0.82
CDR1P51861 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDR1P51861 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDR1P51861 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CDR1P51861 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDR1P51861 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDR1P51861 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDR1P51861 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDR1P51861 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDR1P51861 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.17■□□□□ 0.82
CDR1P51861 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDR1P51861 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CDR1P51861 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDR1P51861 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDR1P51861 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDR1P51861 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.17■□□□□ 0.82
CDR1P51861 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.17■□□□□ 0.82
CDR1P51861 AL138966.2-201ENST00000621997 464 ntBASIC20.17■□□□□ 0.82
CDR1P51861 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CDR1P51861 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.17■□□□□ 0.82
CDR1P51861 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.17■□□□□ 0.82
CDR1P51861 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDR1P51861 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.17■□□□□ 0.82
CDR1P51861 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDR1P51861 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.17■□□□□ 0.82
CDR1P51861 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
CDR1P51861 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDR1P51861 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDR1P51861 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDR1P51861 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDR1P51861 TSPY17P-201ENST00000450329 467 ntBASIC20.16■□□□□ 0.82
CDR1P51861 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDR1P51861 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.16■□□□□ 0.82
CDR1P51861 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDR1P51861 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDR1P51861 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDR1P51861 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CDR1P51861 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDR1P51861 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CDR1P51861 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.15■□□□□ 0.82
CDR1P51861 AL049812.1-201ENST00000432563 2267 ntBASIC20.15■□□□□ 0.82
CDR1P51861 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CDR1P51861 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.15■□□□□ 0.82
CDR1P51861 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDR1P51861 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CDR1P51861 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CDR1P51861 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDR1P51861 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CDR1P51861 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.15■□□□□ 0.82
CDR1P51861 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDR1P51861 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.15■□□□□ 0.82
CDR1P51861 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CDR1P51861 AC011558.1-201ENST00000623459 338 ntBASIC20.15■□□□□ 0.82
CDR1P51861 AC141257.4-201ENST00000634557 245 ntBASIC20.15■□□□□ 0.82
CDR1P51861 AC136944.6-201ENST00000634818 245 ntBASIC20.15■□□□□ 0.82
CDR1P51861 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CDR1P51861 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDR1P51861 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDR1P51861 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CDR1P51861 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDR1P51861 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CDR1P51861 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDR1P51861 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDR1P51861 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDR1P51861 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.15■□□□□ 0.82
CDR1P51861 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDR1P51861 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDR1P51861 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.82
CDR1P51861 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CDR1P51861 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.82
CDR1P51861 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDR1P51861 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDR1P51861 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDR1P51861 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDR1P51861 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDR1P51861 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDR1P51861 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDR1P51861 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDR1P51861 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDR1P51861 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDR1P51861 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.14■□□□□ 0.81
CDR1P51861 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.14■□□□□ 0.81
CDR1P51861 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.14■□□□□ 0.81
CDR1P51861 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.14■□□□□ 0.81
CDR1P51861 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.14■□□□□ 0.81
CDR1P51861 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.14■□□□□ 0.81
CDR1P51861 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CDR1P51861 PRSS44-201ENST00000515154 1146 ntBASIC20.14■□□□□ 0.81
CDR1P51861 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.14■□□□□ 0.81
CDR1P51861 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.14■□□□□ 0.81
CDR1P51861 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.14■□□□□ 0.81
CDR1P51861 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.14■□□□□ 0.81
CDR1P51861 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.14■□□□□ 0.81
CDR1P51861 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDR1P51861 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDR1P51861 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms