Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PDE6CP51160 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.93■□□□□ 0.78
PDE6CP51160 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PDE6CP51160 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.93■□□□□ 0.78
PDE6CP51160 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PDE6CP51160 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PDE6CP51160 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.93■□□□□ 0.78
PDE6CP51160 AK4P3-201ENST00000418260 669 ntBASIC19.93■□□□□ 0.78
PDE6CP51160 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 AC006011.2-201ENST00000621313 1158 ntBASIC19.93■□□□□ 0.78
PDE6CP51160 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.93■□□□□ 0.78
PDE6CP51160 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.93■□□□□ 0.78
PDE6CP51160 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.93■□□□□ 0.78
PDE6CP51160 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6CP51160 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.93■□□□□ 0.78
PDE6CP51160 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.93■□□□□ 0.78
PDE6CP51160 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PDE6CP51160 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.92■□□□□ 0.78
PDE6CP51160 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.92■□□□□ 0.78
PDE6CP51160 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PDE6CP51160 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.92■□□□□ 0.78
PDE6CP51160 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PDE6CP51160 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.92■□□□□ 0.78
PDE6CP51160 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.92■□□□□ 0.78
PDE6CP51160 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.92■□□□□ 0.78
PDE6CP51160 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.92■□□□□ 0.78
PDE6CP51160 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.92■□□□□ 0.78
PDE6CP51160 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDE6CP51160 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PDE6CP51160 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PDE6CP51160 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6CP51160 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PDE6CP51160 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDE6CP51160 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.91■□□□□ 0.78
PDE6CP51160 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6CP51160 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.91■□□□□ 0.78
PDE6CP51160 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.91■□□□□ 0.78
PDE6CP51160 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.91■□□□□ 0.78
PDE6CP51160 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6CP51160 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6CP51160 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6CP51160 AP000523.1-201ENST00000398242 1049 ntBASIC19.91■□□□□ 0.78
PDE6CP51160 COX11P1-201ENST00000489116 835 ntBASIC19.91■□□□□ 0.78
PDE6CP51160 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.91■□□□□ 0.78
PDE6CP51160 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PDE6CP51160 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
PDE6CP51160 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
PDE6CP51160 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.91■□□□□ 0.78
PDE6CP51160 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PDE6CP51160 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PDE6CP51160 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6CP51160 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
PDE6CP51160 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6CP51160 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6CP51160 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6CP51160 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
PDE6CP51160 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6CP51160 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6CP51160 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6CP51160 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6CP51160 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.9■□□□□ 0.78
PDE6CP51160 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6CP51160 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6CP51160 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6CP51160 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.9■□□□□ 0.78
PDE6CP51160 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.9■□□□□ 0.78
PDE6CP51160 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.9■□□□□ 0.78
PDE6CP51160 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.9■□□□□ 0.78
PDE6CP51160 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PDE6CP51160 AC141257.4-201ENST00000634557 245 ntBASIC19.9■□□□□ 0.78
PDE6CP51160 AC136944.6-201ENST00000634818 245 ntBASIC19.9■□□□□ 0.78
PDE6CP51160 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.9■□□□□ 0.78
PDE6CP51160 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms