Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SLC6A12P48065 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SLC6A12P48065 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC6A12P48065 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SLC6A12P48065 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A12P48065 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A12P48065 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A12P48065 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A12P48065 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A12P48065 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC6A12P48065 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A12P48065 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A12P48065 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A12P48065 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A12P48065 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC6A12P48065 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC6A12P48065 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC6A12P48065 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC6A12P48065 AC024243.1-201ENST00000609234 778 ntBASIC17.8■□□□□ 0.44
SLC6A12P48065 AC012306.2-201ENST00000609350 630 ntBASIC17.8■□□□□ 0.44
SLC6A12P48065 AL138966.2-201ENST00000621997 464 ntBASIC17.8■□□□□ 0.44
SLC6A12P48065 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SLC6A12P48065 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SLC6A12P48065 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A12P48065 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A12P48065 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SLC6A12P48065 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC6A12P48065 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
SLC6A12P48065 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A12P48065 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC6A12P48065 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A12P48065 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC6A12P48065 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SLC6A12P48065 PHGDH-209ENST00000641074 1780 ntBASIC17.79■□□□□ 0.44
SLC6A12P48065 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A12P48065 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A12P48065 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
SLC6A12P48065 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A12P48065 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A12P48065 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC6A12P48065 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A12P48065 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A12P48065 SLC25A3P1-201ENST00000443844 931 ntBASIC17.79■□□□□ 0.44
SLC6A12P48065 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.79■□□□□ 0.44
SLC6A12P48065 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A12P48065 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.79■□□□□ 0.44
SLC6A12P48065 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A12P48065 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SLC6A12P48065 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC6A12P48065 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A12P48065 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC6A12P48065 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC6A12P48065 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC6A12P48065 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A12P48065 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A12P48065 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SLC6A12P48065 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
SLC6A12P48065 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC6A12P48065 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A12P48065 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A12P48065 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A12P48065 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SLC6A12P48065 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC6A12P48065 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC6A12P48065 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC6A12P48065 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC6A12P48065 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC6A12P48065 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC6A12P48065 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SLC6A12P48065 AC073912.3-201ENST00000624414 853 ntBASIC17.78■□□□□ 0.44
SLC6A12P48065 AC141257.4-201ENST00000634557 245 ntBASIC17.78■□□□□ 0.44
SLC6A12P48065 AC136944.6-201ENST00000634818 245 ntBASIC17.78■□□□□ 0.44
SLC6A12P48065 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A12P48065 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A12P48065 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A12P48065 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SLC6A12P48065 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A12P48065 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
SLC6A12P48065 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A12P48065 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SLC6A12P48065 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC6A12P48065 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SLC6A12P48065 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC6A12P48065 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SLC6A12P48065 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A12P48065 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A12P48065 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A12P48065 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A12P48065 LINC01126-201ENST00000623515 1646 ntBASIC17.77■□□□□ 0.44
SLC6A12P48065 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SLC6A12P48065 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC6A12P48065 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A12P48065 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A12P48065 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A12P48065 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A12P48065 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A12P48065 MIR3917-201ENST00000580971 93 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms