Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP13P45452 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP13P45452 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MMP13P45452 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP13P45452 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP13P45452 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.19■□□□□ 0.66
MMP13P45452 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP13P45452 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.19■□□□□ 0.66
MMP13P45452 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP13P45452 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MMP13P45452 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MMP13P45452 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.19■□□□□ 0.66
MMP13P45452 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.19■□□□□ 0.66
MMP13P45452 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.19■□□□□ 0.66
MMP13P45452 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.19■□□□□ 0.66
MMP13P45452 NAPSB-206ENST00000562112 1266 ntBASIC19.19■□□□□ 0.66
MMP13P45452 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.19■□□□□ 0.66
MMP13P45452 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP13P45452 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MMP13P45452 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP13P45452 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.19■□□□□ 0.66
MMP13P45452 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MMP13P45452 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
MMP13P45452 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP13P45452 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MMP13P45452 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
MMP13P45452 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.18■□□□□ 0.66
MMP13P45452 AC126763.1-201ENST00000552015 2118 ntBASIC19.18■□□□□ 0.66
MMP13P45452 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 CYP2D8P-201ENST00000433633 1490 ntBASIC19.18■□□□□ 0.66
MMP13P45452 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
MMP13P45452 CCR12P-201ENST00000446203 998 ntBASIC19.18■□□□□ 0.66
MMP13P45452 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.18■□□□□ 0.66
MMP13P45452 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.18■□□□□ 0.66
MMP13P45452 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.18■□□□□ 0.66
MMP13P45452 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 AC008622.2-201ENST00000617006 1229 ntBASIC19.18■□□□□ 0.66
MMP13P45452 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.18■□□□□ 0.66
MMP13P45452 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.18■□□□□ 0.66
MMP13P45452 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.18■□□□□ 0.66
MMP13P45452 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP13P45452 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP13P45452 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP13P45452 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.17■□□□□ 0.66
MMP13P45452 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP13P45452 KRT8P32-201ENST00000512863 1461 ntBASIC19.17■□□□□ 0.66
MMP13P45452 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.17■□□□□ 0.66
MMP13P45452 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP13P45452 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP13P45452 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MMP13P45452 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP13P45452 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.17■□□□□ 0.66
MMP13P45452 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MMP13P45452 TSPY17P-201ENST00000450329 467 ntBASIC19.17■□□□□ 0.66
MMP13P45452 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.17■□□□□ 0.66
MMP13P45452 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.17■□□□□ 0.66
MMP13P45452 AL023803.3-201ENST00000615559 522 ntBASIC19.17■□□□□ 0.66
MMP13P45452 AC010947.1-201ENST00000623454 693 ntBASIC19.17■□□□□ 0.66
MMP13P45452 AC116562.4-202ENST00000641738 218 ntBASIC19.17■□□□□ 0.66
MMP13P45452 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.17■□□□□ 0.66
MMP13P45452 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP13P45452 PRORSD1P-202ENST00000563365 2154 ntBASIC19.17■□□□□ 0.66
MMP13P45452 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP13P45452 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP13P45452 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.17■□□□□ 0.66
MMP13P45452 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP13P45452 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.17■□□□□ 0.66
MMP13P45452 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
MMP13P45452 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.17■□□□□ 0.66
MMP13P45452 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.17■□□□□ 0.66
MMP13P45452 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP13P45452 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MMP13P45452 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP13P45452 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP13P45452 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP13P45452 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP13P45452 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.16■□□□□ 0.66
MMP13P45452 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
MMP13P45452 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.16■□□□□ 0.66
MMP13P45452 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP13P45452 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP13P45452 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP13P45452 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP13P45452 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP13P45452 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP13P45452 TSPY14P-201ENST00000303979 915 ntBASIC19.16■□□□□ 0.66
MMP13P45452 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms