Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC1A2P43004 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.39■□□□□ 0.54
SLC1A2P43004 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC1A2P43004 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
SLC1A2P43004 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.39■□□□□ 0.54
SLC1A2P43004 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC1A2P43004 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SLC1A2P43004 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC1A2P43004 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SLC1A2P43004 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SLC1A2P43004 AC007663.1-201ENST00000438948 1240 ntBASIC18.39■□□□□ 0.53
SLC1A2P43004 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC1A2P43004 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 TSPY15P-201ENST00000457163 923 ntBASIC18.39■□□□□ 0.53
SLC1A2P43004 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC1A2P43004 MIR4497-201ENST00000583208 89 ntBASIC18.39■□□□□ 0.53
SLC1A2P43004 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC1A2P43004 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SLC1A2P43004 AC116562.4-202ENST00000641738 218 ntBASIC18.39■□□□□ 0.53
SLC1A2P43004 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC1A2P43004 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC1A2P43004 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC1A2P43004 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A2P43004 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC1A2P43004 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SLC1A2P43004 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC1A2P43004 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC1A2P43004 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 KRT18P23-201ENST00000435622 1283 ntBASIC18.38■□□□□ 0.53
SLC1A2P43004 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC1A2P43004 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC1A2P43004 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 BX088651.1-201ENST00000540551 451 ntBASIC18.38■□□□□ 0.53
SLC1A2P43004 C2orf69P3-201ENST00000565542 1120 ntBASIC18.38■□□□□ 0.53
SLC1A2P43004 WWOX-216ENST00000569818 525 ntBASIC18.38■□□□□ 0.53
SLC1A2P43004 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC1A2P43004 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC1A2P43004 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC1A2P43004 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC1A2P43004 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 REXO1L9P-201ENST00000604264 2108 ntBASIC18.38■□□□□ 0.53
SLC1A2P43004 HOXB1-202ENST00000577092 1414 ntBASIC18.38■□□□□ 0.53
SLC1A2P43004 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SLC1A2P43004 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 AL163051.1-201ENST00000569214 1512 ntBASIC18.38■□□□□ 0.53
SLC1A2P43004 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC1A2P43004 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC1A2P43004 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
SLC1A2P43004 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A2P43004 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC1A2P43004 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A2P43004 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC1A2P43004 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A2P43004 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC1A2P43004 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC1A2P43004 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A2P43004 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SLC1A2P43004 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
SLC1A2P43004 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SLC1A2P43004 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC1A2P43004 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SLC1A2P43004 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SLC1A2P43004 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.37■□□□□ 0.53
SLC1A2P43004 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
SLC1A2P43004 KRT8P9-201ENST00000558927 1449 ntBASIC18.37■□□□□ 0.53
SLC1A2P43004 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A2P43004 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SLC1A2P43004 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
SLC1A2P43004 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A2P43004 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC1A2P43004 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms