Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 UNC93B2-201ENST00000285383 730 ntBASIC18.57■□□□□ 0.56
CCNFP41002 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNFP41002 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.57■□□□□ 0.56
CCNFP41002 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CCNFP41002 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.57■□□□□ 0.56
CCNFP41002 CKBP1-201ENST00000565489 1086 ntBASIC18.57■□□□□ 0.56
CCNFP41002 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.57■□□□□ 0.56
CCNFP41002 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.57■□□□□ 0.56
CCNFP41002 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CCNFP41002 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCNFP41002 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCNFP41002 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNFP41002 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCNFP41002 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCNFP41002 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.57■□□□□ 0.56
CCNFP41002 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNFP41002 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCNFP41002 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNFP41002 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCNFP41002 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCNFP41002 AC096733.2-201ENST00000609937 1394 ntBASIC18.56■□□□□ 0.56
CCNFP41002 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCNFP41002 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.56■□□□□ 0.56
CCNFP41002 AC138028.4-201ENST00000564984 1845 ntBASIC18.56■□□□□ 0.56
CCNFP41002 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CCNFP41002 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.56■□□□□ 0.56
CCNFP41002 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCNFP41002 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCNFP41002 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.56■□□□□ 0.56
CCNFP41002 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.56■□□□□ 0.56
CCNFP41002 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.56■□□□□ 0.56
CCNFP41002 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.56■□□□□ 0.56
CCNFP41002 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCNFP41002 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCNFP41002 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCNFP41002 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCNFP41002 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCNFP41002 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCNFP41002 AC099398.1-201ENST00000567919 2776 ntBASIC18.56■□□□□ 0.56
CCNFP41002 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.56■□□□□ 0.56
CCNFP41002 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.56■□□□□ 0.56
CCNFP41002 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCNFP41002 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCNFP41002 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.55■□□□□ 0.56
CCNFP41002 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.55■□□□□ 0.56
CCNFP41002 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.55■□□□□ 0.56
CCNFP41002 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.55■□□□□ 0.56
CCNFP41002 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.55■□□□□ 0.56
CCNFP41002 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.55■□□□□ 0.56
CCNFP41002 LINC00896-202ENST00000609602 2128 ntBASIC18.55■□□□□ 0.56
CCNFP41002 AC139713.2-201ENST00000641328 2723 ntBASIC18.55■□□□□ 0.56
CCNFP41002 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.55■□□□□ 0.56
CCNFP41002 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 AC097488.1-201ENST00000507834 756 ntBASIC18.55■□□□□ 0.56
CCNFP41002 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.55■□□□□ 0.56
CCNFP41002 SLC25A1P4-201ENST00000567977 778 ntBASIC18.55■□□□□ 0.56
CCNFP41002 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.55■□□□□ 0.56
CCNFP41002 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.55■□□□□ 0.56
CCNFP41002 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.55■□□□□ 0.56
CCNFP41002 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.55■□□□□ 0.56
CCNFP41002 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNFP41002 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCNFP41002 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCNFP41002 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CCNFP41002 AC134043.2-201ENST00000624206 2238 ntBASIC18.54■□□□□ 0.56
CCNFP41002 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.54■□□□□ 0.56
CCNFP41002 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNFP41002 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCNFP41002 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CCNFP41002 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.54■□□□□ 0.56
CCNFP41002 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.54■□□□□ 0.56
CCNFP41002 RBM17P1-201ENST00000453646 1190 ntBASIC18.54■□□□□ 0.56
CCNFP41002 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNFP41002 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.54■□□□□ 0.56
CCNFP41002 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CCNFP41002 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms