Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.82■□□□□ 0.76
CASQ1P31415 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ1P31415 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.82■□□□□ 0.76
CASQ1P31415 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.82■□□□□ 0.76
CASQ1P31415 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
CASQ1P31415 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.82■□□□□ 0.76
CASQ1P31415 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.82■□□□□ 0.76
CASQ1P31415 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.82■□□□□ 0.76
CASQ1P31415 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ1P31415 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.82■□□□□ 0.76
CASQ1P31415 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CASQ1P31415 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CASQ1P31415 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ1P31415 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.82■□□□□ 0.76
CASQ1P31415 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ1P31415 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.82■□□□□ 0.76
CASQ1P31415 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ1P31415 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ1P31415 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ1P31415 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.81■□□□□ 0.76
CASQ1P31415 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.81■□□□□ 0.76
CASQ1P31415 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ1P31415 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ1P31415 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.81■□□□□ 0.76
CASQ1P31415 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CASQ1P31415 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ1P31415 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
CASQ1P31415 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ1P31415 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ1P31415 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
CASQ1P31415 MIR638-201ENST00000385237 100 ntBASIC19.81■□□□□ 0.76
CASQ1P31415 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CASQ1P31415 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.81■□□□□ 0.76
CASQ1P31415 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.81■□□□□ 0.76
CASQ1P31415 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ1P31415 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.81■□□□□ 0.76
CASQ1P31415 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ1P31415 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ1P31415 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.81■□□□□ 0.76
CASQ1P31415 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ1P31415 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ1P31415 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.81■□□□□ 0.76
CASQ1P31415 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ1P31415 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CASQ1P31415 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CASQ1P31415 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ1P31415 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CASQ1P31415 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ1P31415 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
CASQ1P31415 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.81■□□□□ 0.76
CASQ1P31415 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ1P31415 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ1P31415 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ1P31415 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.8■□□□□ 0.76
CASQ1P31415 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ1P31415 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.8■□□□□ 0.76
CASQ1P31415 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ1P31415 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ1P31415 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.8■□□□□ 0.76
CASQ1P31415 AC046158.3-201ENST00000624947 2558 ntBASIC19.8■□□□□ 0.76
CASQ1P31415 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.8■□□□□ 0.76
CASQ1P31415 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ1P31415 BX276092.2-201ENST00000417668 665 ntBASIC19.8■□□□□ 0.76
CASQ1P31415 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CASQ1P31415 ZNRF2P3-201ENST00000424200 374 ntBASIC19.8■□□□□ 0.76
CASQ1P31415 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.8■□□□□ 0.76
CASQ1P31415 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.8■□□□□ 0.76
CASQ1P31415 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ1P31415 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.8■□□□□ 0.76
CASQ1P31415 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.8■□□□□ 0.76
CASQ1P31415 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.8■□□□□ 0.76
CASQ1P31415 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ1P31415 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ1P31415 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ1P31415 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.8■□□□□ 0.76
CASQ1P31415 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ1P31415 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.8■□□□□ 0.76
CASQ1P31415 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASQ1P31415 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASQ1P31415 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASQ1P31415 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CASQ1P31415 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.79■□□□□ 0.76
CASQ1P31415 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.79■□□□□ 0.76
CASQ1P31415 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CASQ1P31415 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASQ1P31415 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASQ1P31415 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CASQ1P31415 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.79■□□□□ 0.76
CASQ1P31415 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CASQ1P31415 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASQ1P31415 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASQ1P31415 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CASQ1P31415 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CASQ1P31415 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CASQ1P31415 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.79■□□□□ 0.76
CASQ1P31415 AC006015.1-201ENST00000429970 570 ntBASIC19.79■□□□□ 0.76
CASQ1P31415 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.79■□□□□ 0.76
CASQ1P31415 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.79■□□□□ 0.76
CASQ1P31415 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CASQ1P31415 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms