Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
HOXC8P31273 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXC8P31273 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 RCN1P2-201ENST00000398357 915 ntBASIC20.09■□□□□ 0.81
HOXC8P31273 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXC8P31273 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.09■□□□□ 0.81
HOXC8P31273 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXC8P31273 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXC8P31273 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 AL499627.1-201ENST00000569373 2188 ntBASIC20.09■□□□□ 0.81
HOXC8P31273 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
HOXC8P31273 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.09■□□□□ 0.81
HOXC8P31273 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.08■□□□□ 0.81
HOXC8P31273 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.08■□□□□ 0.81
HOXC8P31273 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HOXC8P31273 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.08■□□□□ 0.81
HOXC8P31273 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HOXC8P31273 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.08■□□□□ 0.81
HOXC8P31273 TP73-AS1-210ENST00000637775 1455 ntBASIC20.08■□□□□ 0.81
HOXC8P31273 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HOXC8P31273 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HOXC8P31273 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.08■□□□□ 0.81
HOXC8P31273 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.08■□□□□ 0.81
HOXC8P31273 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.08■□□□□ 0.81
HOXC8P31273 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.08■□□□□ 0.81
HOXC8P31273 AC064862.7-201ENST00000604520 867 ntBASIC20.08■□□□□ 0.81
HOXC8P31273 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.08■□□□□ 0.81
HOXC8P31273 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HOXC8P31273 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.08■□□□□ 0.81
HOXC8P31273 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.08■□□□□ 0.8
HOXC8P31273 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
HOXC8P31273 LINC01126-201ENST00000623515 1646 ntBASIC20.08■□□□□ 0.8
HOXC8P31273 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HOXC8P31273 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.08■□□□□ 0.8
HOXC8P31273 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.08■□□□□ 0.8
HOXC8P31273 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HOXC8P31273 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
HOXC8P31273 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
HOXC8P31273 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.07■□□□□ 0.8
HOXC8P31273 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
HOXC8P31273 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.07■□□□□ 0.8
HOXC8P31273 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.07■□□□□ 0.8
HOXC8P31273 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
HOXC8P31273 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HOXC8P31273 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
HOXC8P31273 KRT18P67-201ENST00000432816 1264 ntBASIC20.07■□□□□ 0.8
HOXC8P31273 AC132008.2-207ENST00000454517 770 ntBASIC20.07■□□□□ 0.8
HOXC8P31273 AC018712.1-201ENST00000455767 687 ntBASIC20.07■□□□□ 0.8
HOXC8P31273 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
HOXC8P31273 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 AL773604.1-201ENST00000617417 272 ntBASIC20.07■□□□□ 0.8
HOXC8P31273 AC023511.2-201ENST00000618803 211 ntBASIC20.07■□□□□ 0.8
HOXC8P31273 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.07■□□□□ 0.8
HOXC8P31273 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.07■□□□□ 0.8
HOXC8P31273 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC8P31273 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC8P31273 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC8P31273 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC8P31273 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC8P31273 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXC8P31273 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HOXC8P31273 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC8P31273 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC8P31273 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC8P31273 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC8P31273 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC8P31273 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXC8P31273 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC8P31273 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC8P31273 MTCL1P1-201ENST00000446207 792 ntBASIC20.06■□□□□ 0.8
HOXC8P31273 FAM197Y8-203ENST00000450145 560 ntBASIC20.06■□□□□ 0.8
HOXC8P31273 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.06■□□□□ 0.8
HOXC8P31273 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXC8P31273 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXC8P31273 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXC8P31273 AL355877.3-201ENST00000622820 899 ntBASIC20.06■□□□□ 0.8
HOXC8P31273 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC8P31273 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms