Protein–RNA interactions for Protein: P28070

PSMB4, Proteasome subunit beta type-4, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4P28070 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PSMB4P28070 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PSMB4P28070 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.79■□□□□ 0.6
PSMB4P28070 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.79■□□□□ 0.6
PSMB4P28070 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.79■□□□□ 0.6
PSMB4P28070 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.79■□□□□ 0.6
PSMB4P28070 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.79■□□□□ 0.6
PSMB4P28070 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PSMB4P28070 AC066615.1-201ENST00000640911 628 ntBASIC18.79■□□□□ 0.6
PSMB4P28070 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PSMB4P28070 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PSMB4P28070 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.79■□□□□ 0.6
PSMB4P28070 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.79■□□□□ 0.6
PSMB4P28070 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.79■□□□□ 0.6
PSMB4P28070 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PSMB4P28070 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.79■□□□□ 0.6
PSMB4P28070 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.79■□□□□ 0.6
PSMB4P28070 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
PSMB4P28070 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.78■□□□□ 0.6
PSMB4P28070 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.78■□□□□ 0.6
PSMB4P28070 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.78■□□□□ 0.6
PSMB4P28070 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PSMB4P28070 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.78■□□□□ 0.6
PSMB4P28070 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PSMB4P28070 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PSMB4P28070 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.78■□□□□ 0.6
PSMB4P28070 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 HOXB1-202ENST00000577092 1414 ntBASIC18.78■□□□□ 0.6
PSMB4P28070 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 MMP23A-201ENST00000234610 1017 ntBASIC18.78■□□□□ 0.6
PSMB4P28070 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.78■□□□□ 0.6
PSMB4P28070 NAPSB-206ENST00000562112 1266 ntBASIC18.78■□□□□ 0.6
PSMB4P28070 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PSMB4P28070 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.78■□□□□ 0.6
PSMB4P28070 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.78■□□□□ 0.6
PSMB4P28070 AC010653.2-201ENST00000623505 997 ntBASIC18.78■□□□□ 0.6
PSMB4P28070 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.78■□□□□ 0.6
PSMB4P28070 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PSMB4P28070 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.78■□□□□ 0.6
PSMB4P28070 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.78■□□□□ 0.6
PSMB4P28070 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PSMB4P28070 AL133373.2-201ENST00000623187 2828 ntBASIC18.78■□□□□ 0.6
PSMB4P28070 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.77■□□□□ 0.6
PSMB4P28070 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PSMB4P28070 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
PSMB4P28070 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.77■□□□□ 0.6
PSMB4P28070 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PSMB4P28070 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PSMB4P28070 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PSMB4P28070 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.77■□□□□ 0.6
PSMB4P28070 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PSMB4P28070 AL163051.1-201ENST00000569214 1512 ntBASIC18.77■□□□□ 0.6
PSMB4P28070 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.77■□□□□ 0.6
PSMB4P28070 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSMB4P28070 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PSMB4P28070 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.77■□□□□ 0.6
PSMB4P28070 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
PSMB4P28070 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.77■□□□□ 0.59
PSMB4P28070 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.77■□□□□ 0.59
PSMB4P28070 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PSMB4P28070 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PSMB4P28070 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PSMB4P28070 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PSMB4P28070 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PSMB4P28070 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PSMB4P28070 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PSMB4P28070 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms