Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMP24386 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
CHMP24386 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP24386 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMP24386 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
CHMP24386 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMP24386 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CHMP24386 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMP24386 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP24386 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP24386 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP24386 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP24386 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CHMP24386 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.27■□□□□ 0.35
CHMP24386 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP24386 LINC01568-207ENST00000641790 1380 ntBASIC17.27■□□□□ 0.35
CHMP24386 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.27■□□□□ 0.35
CHMP24386 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP24386 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP24386 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP24386 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CHMP24386 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP24386 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP24386 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP24386 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHMP24386 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP24386 SLC25A1P2-201ENST00000430693 912 ntBASIC17.26■□□□□ 0.35
CHMP24386 AC128688.1-201ENST00000487626 519 ntBASIC17.26■□□□□ 0.35
CHMP24386 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP24386 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP24386 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHMP24386 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.26■□□□□ 0.35
CHMP24386 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP24386 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP24386 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CHMP24386 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 KRT8P11-201ENST00000409686 1436 ntBASIC17.26■□□□□ 0.35
CHMP24386 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP24386 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP24386 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.25■□□□□ 0.35
CHMP24386 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP24386 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.25■□□□□ 0.35
CHMP24386 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP24386 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP24386 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHMP24386 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHMP24386 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP24386 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP24386 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP24386 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP24386 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP24386 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP24386 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
CHMP24386 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHMP24386 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP24386 CCR12P-201ENST00000446203 998 ntBASIC17.25■□□□□ 0.35
CHMP24386 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.25■□□□□ 0.35
CHMP24386 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP24386 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP24386 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP24386 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.25■□□□□ 0.35
CHMP24386 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP24386 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CHMP24386 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.25■□□□□ 0.35
CHMP24386 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP24386 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP24386 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP24386 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CHMP24386 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP24386 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.24■□□□□ 0.35
CHMP24386 AL162741.1-201ENST00000565563 1558 ntBASIC17.24■□□□□ 0.35
CHMP24386 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.24■□□□□ 0.35
CHMP24386 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP24386 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP24386 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP24386 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP24386 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP24386 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.24■□□□□ 0.35
CHMP24386 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP24386 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP24386 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.24■□□□□ 0.35
CHMP24386 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.24■□□□□ 0.35
CHMP24386 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.24■□□□□ 0.35
CHMP24386 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
CHMP24386 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.24■□□□□ 0.35
CHMP24386 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms