Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.67■□□□□ 0.58
CHRNB1P11230 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.67■□□□□ 0.58
CHRNB1P11230 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRNB1P11230 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CHRNB1P11230 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CHRNB1P11230 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNB1P11230 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNB1P11230 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNB1P11230 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHRNB1P11230 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
CHRNB1P11230 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB1P11230 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.66■□□□□ 0.58
CHRNB1P11230 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CHRNB1P11230 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRNB1P11230 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB1P11230 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRNB1P11230 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB1P11230 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRNB1P11230 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB1P11230 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRNB1P11230 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB1P11230 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CHRNB1P11230 KRT18P58-201ENST00000527480 1120 ntBASIC18.66■□□□□ 0.58
CHRNB1P11230 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.66■□□□□ 0.58
CHRNB1P11230 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.66■□□□□ 0.58
CHRNB1P11230 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRNB1P11230 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.66■□□□□ 0.58
CHRNB1P11230 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHRNB1P11230 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB1P11230 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB1P11230 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB1P11230 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CHRNB1P11230 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CHRNB1P11230 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRNB1P11230 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRNB1P11230 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB1P11230 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CHRNB1P11230 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB1P11230 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB1P11230 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB1P11230 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRNB1P11230 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CHRNB1P11230 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB1P11230 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRNB1P11230 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CHRNB1P11230 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB1P11230 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB1P11230 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB1P11230 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHRNB1P11230 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.65■□□□□ 0.58
CHRNB1P11230 AC106730.1-201ENST00000566722 1090 ntBASIC18.65■□□□□ 0.58
CHRNB1P11230 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.65■□□□□ 0.58
CHRNB1P11230 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB1P11230 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.65■□□□□ 0.58
CHRNB1P11230 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB1P11230 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB1P11230 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB1P11230 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.65■□□□□ 0.58
CHRNB1P11230 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB1P11230 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB1P11230 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHRNB1P11230 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CHRNB1P11230 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHRNB1P11230 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.64■□□□□ 0.57
CHRNB1P11230 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHRNB1P11230 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 RNPS1P1-201ENST00000507437 918 ntBASIC18.64■□□□□ 0.57
CHRNB1P11230 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.64■□□□□ 0.57
CHRNB1P11230 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.64■□□□□ 0.57
CHRNB1P11230 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.64■□□□□ 0.57
CHRNB1P11230 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.64■□□□□ 0.57
CHRNB1P11230 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.64■□□□□ 0.57
CHRNB1P11230 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.64■□□□□ 0.57
CHRNB1P11230 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
CHRNB1P11230 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.64■□□□□ 0.57
CHRNB1P11230 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB1P11230 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.64■□□□□ 0.57
CHRNB1P11230 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.64■□□□□ 0.57
CHRNB1P11230 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRNB1P11230 Z98044.1-201ENST00000632503 1764 ntBASIC18.63■□□□□ 0.57
CHRNB1P11230 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHRNB1P11230 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB1P11230 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB1P11230 FP475955.4-201ENST00000623131 1990 ntBASIC18.63■□□□□ 0.57
CHRNB1P11230 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB1P11230 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB1P11230 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms