Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.63■□□□□ 0.89
RARBP10826 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.63■□□□□ 0.89
RARBP10826 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARBP10826 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RARBP10826 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RARBP10826 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.63■□□□□ 0.89
RARBP10826 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RARBP10826 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARBP10826 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.63■□□□□ 0.89
RARBP10826 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RARBP10826 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARBP10826 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RARBP10826 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RARBP10826 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.62■□□□□ 0.89
RARBP10826 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RARBP10826 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.62■□□□□ 0.89
RARBP10826 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RARBP10826 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RARBP10826 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RARBP10826 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RARBP10826 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RARBP10826 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.62■□□□□ 0.89
RARBP10826 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.62■□□□□ 0.89
RARBP10826 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.62■□□□□ 0.89
RARBP10826 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.62■□□□□ 0.89
RARBP10826 KRT18P58-201ENST00000527480 1120 ntBASIC20.62■□□□□ 0.89
RARBP10826 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RARBP10826 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.62■□□□□ 0.89
RARBP10826 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.62■□□□□ 0.89
RARBP10826 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.62■□□□□ 0.89
RARBP10826 AC114341.1-201ENST00000618070 349 ntBASIC20.62■□□□□ 0.89
RARBP10826 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RARBP10826 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RARBP10826 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RARBP10826 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RARBP10826 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RARBP10826 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RARBP10826 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
RARBP10826 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RARBP10826 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
RARBP10826 KRT8P50-201ENST00000562022 1438 ntBASIC20.61■□□□□ 0.89
RARBP10826 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.61■□□□□ 0.89
RARBP10826 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RARBP10826 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
RARBP10826 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RARBP10826 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
RARBP10826 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RARBP10826 AC125437.2-201ENST00000625180 2167 ntBASIC20.61■□□□□ 0.89
RARBP10826 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RARBP10826 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RARBP10826 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.61■□□□□ 0.89
RARBP10826 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.61■□□□□ 0.89
RARBP10826 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RARBP10826 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.61■□□□□ 0.89
RARBP10826 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.61■□□□□ 0.89
RARBP10826 AC008608.2-201ENST00000606089 416 ntBASIC20.61■□□□□ 0.89
RARBP10826 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.61■□□□□ 0.89
RARBP10826 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.61■□□□□ 0.89
RARBP10826 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.61■□□□□ 0.89
RARBP10826 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RARBP10826 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RARBP10826 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RARBP10826 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RARBP10826 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.61■□□□□ 0.89
RARBP10826 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.61■□□□□ 0.89
RARBP10826 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RARBP10826 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARBP10826 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARBP10826 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARBP10826 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RARBP10826 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARBP10826 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RARBP10826 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RARBP10826 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.6■□□□□ 0.89
RARBP10826 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARBP10826 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.6■□□□□ 0.89
RARBP10826 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.6■□□□□ 0.89
RARBP10826 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.6■□□□□ 0.89
RARBP10826 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RARBP10826 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.6■□□□□ 0.89
RARBP10826 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.6■□□□□ 0.89
RARBP10826 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.6■□□□□ 0.89
RARBP10826 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.6■□□□□ 0.89
RARBP10826 AC148477.8-201ENST00000624298 468 ntBASIC20.6■□□□□ 0.89
RARBP10826 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARBP10826 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RARBP10826 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARBP10826 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARBP10826 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.6■□□□□ 0.89
RARBP10826 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARBP10826 AC141586.3-201ENST00000562166 1838 ntBASIC20.6■□□□□ 0.89
RARBP10826 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RARBP10826 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARBP10826 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
RARBP10826 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.59■□□□□ 0.89
RARBP10826 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RARBP10826 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RARBP10826 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RARBP10826 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RARBP10826 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms