Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.59■□□□□ 0.57
RETP07949 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RETP07949 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RETP07949 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RETP07949 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.59■□□□□ 0.57
RETP07949 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RETP07949 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RETP07949 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RETP07949 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RETP07949 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.58■□□□□ 0.57
RETP07949 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RETP07949 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RETP07949 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RETP07949 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RETP07949 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
RETP07949 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RETP07949 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
RETP07949 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
RETP07949 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RETP07949 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.58■□□□□ 0.56
RETP07949 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RETP07949 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.58■□□□□ 0.56
RETP07949 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.58■□□□□ 0.56
RETP07949 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.58■□□□□ 0.56
RETP07949 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.58■□□□□ 0.56
RETP07949 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.58■□□□□ 0.56
RETP07949 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RETP07949 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RETP07949 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.58■□□□□ 0.56
RETP07949 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.58■□□□□ 0.56
RETP07949 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.58■□□□□ 0.56
RETP07949 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.58■□□□□ 0.56
RETP07949 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RETP07949 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.58■□□□□ 0.56
RETP07949 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.58■□□□□ 0.56
RETP07949 AC005332.3-201ENST00000589904 676 ntBASIC18.58■□□□□ 0.56
RETP07949 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.58■□□□□ 0.56
RETP07949 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.58■□□□□ 0.56
RETP07949 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RETP07949 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RETP07949 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RETP07949 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RETP07949 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.58■□□□□ 0.56
RETP07949 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
RETP07949 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RETP07949 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RETP07949 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RETP07949 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RETP07949 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RETP07949 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RETP07949 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RETP07949 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RETP07949 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RETP07949 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RETP07949 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RETP07949 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.57■□□□□ 0.56
RETP07949 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.57■□□□□ 0.56
RETP07949 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
RETP07949 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RETP07949 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RETP07949 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RETP07949 IGHV3-47-201ENST00000425060 335 ntBASIC18.57■□□□□ 0.56
RETP07949 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.57■□□□□ 0.56
RETP07949 SLC25A1P1-201ENST00000528351 927 ntBASIC18.57■□□□□ 0.56
RETP07949 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.57■□□□□ 0.56
RETP07949 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RETP07949 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RETP07949 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.57■□□□□ 0.56
RETP07949 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RETP07949 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RETP07949 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RETP07949 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
RETP07949 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RETP07949 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RETP07949 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RETP07949 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RETP07949 PMS2P7-201ENST00000506558 1336 ntBASIC18.56■□□□□ 0.56
RETP07949 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RETP07949 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RETP07949 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RETP07949 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RETP07949 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RETP07949 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RETP07949 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RETP07949 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.56■□□□□ 0.56
RETP07949 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RETP07949 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.56■□□□□ 0.56
RETP07949 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RETP07949 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.56■□□□□ 0.56
RETP07949 RNPS1P1-201ENST00000507437 918 ntBASIC18.56■□□□□ 0.56
RETP07949 AF238378.1-201ENST00000526806 358 ntBASIC18.56■□□□□ 0.56
RETP07949 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.56■□□□□ 0.56
RETP07949 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.56■□□□□ 0.56
RETP07949 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RETP07949 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms