Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.52■□□□□ 0.08
CD74P04233 PNMA6B-201ENST00000538162 1200 ntBASIC15.52■□□□□ 0.08
CD74P04233 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.52■□□□□ 0.08
CD74P04233 AC092118.2-201ENST00000613495 667 ntBASIC15.52■□□□□ 0.08
CD74P04233 AL050303.2-201ENST00000619798 666 ntBASIC15.52■□□□□ 0.08
CD74P04233 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CD74P04233 GMCL1P1-201ENST00000463439 1581 ntBASIC15.52■□□□□ 0.07
CD74P04233 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.52■□□□□ 0.07
CD74P04233 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.52■□□□□ 0.07
CD74P04233 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.52■□□□□ 0.07
CD74P04233 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD74P04233 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CD74P04233 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CD74P04233 PHGDH-209ENST00000641074 1780 ntBASIC15.52■□□□□ 0.07
CD74P04233 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.52■□□□□ 0.07
CD74P04233 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.52■□□□□ 0.07
CD74P04233 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.51■□□□□ 0.07
CD74P04233 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD74P04233 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
CD74P04233 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.51■□□□□ 0.07
CD74P04233 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD74P04233 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD74P04233 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CD74P04233 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD74P04233 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD74P04233 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.51■□□□□ 0.07
CD74P04233 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD74P04233 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD74P04233 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD74P04233 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.51■□□□□ 0.07
CD74P04233 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD74P04233 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CD74P04233 PRSS44-201ENST00000515154 1146 ntBASIC15.51■□□□□ 0.07
CD74P04233 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CD74P04233 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.51■□□□□ 0.07
CD74P04233 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.51■□□□□ 0.07
CD74P04233 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.51■□□□□ 0.07
CD74P04233 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.51■□□□□ 0.07
CD74P04233 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD74P04233 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD74P04233 AP001094.4-201ENST00000579008 2176 ntBASIC15.51■□□□□ 0.07
CD74P04233 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD74P04233 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CD74P04233 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CD74P04233 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 AC022211.2-201ENST00000585075 2527 ntBASIC15.5■□□□□ 0.07
CD74P04233 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CD74P04233 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 RCC2P3-201ENST00000418112 1537 ntBASIC15.5■□□□□ 0.07
CD74P04233 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CD74P04233 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CD74P04233 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.5■□□□□ 0.07
CD74P04233 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.5■□□□□ 0.07
CD74P04233 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CD74P04233 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CD74P04233 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.5■□□□□ 0.07
CD74P04233 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.5■□□□□ 0.07
CD74P04233 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.5■□□□□ 0.07
CD74P04233 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.5■□□□□ 0.07
CD74P04233 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.5■□□□□ 0.07
CD74P04233 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.5■□□□□ 0.07
CD74P04233 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.5■□□□□ 0.07
CD74P04233 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.5■□□□□ 0.07
CD74P04233 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CD74P04233 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CD74P04233 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
CD74P04233 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CD74P04233 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.5■□□□□ 0.07
CD74P04233 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD74P04233 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD74P04233 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD74P04233 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD74P04233 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CD74P04233 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD74P04233 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD74P04233 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
CD74P04233 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.49■□□□□ 0.07
CD74P04233 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CD74P04233 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms