Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CDKL5O76039 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.45■■□□□ 1.02
CDKL5O76039 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.45■■□□□ 1.02
CDKL5O76039 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CDKL5O76039 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDKL5O76039 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDKL5O76039 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CDKL5O76039 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDKL5O76039 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDKL5O76039 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CDKL5O76039 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDKL5O76039 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.44■■□□□ 1.02
CDKL5O76039 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDKL5O76039 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDKL5O76039 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDKL5O76039 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDKL5O76039 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.44■■□□□ 1.02
CDKL5O76039 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
CDKL5O76039 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.44■■□□□ 1.02
CDKL5O76039 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDKL5O76039 AP000523.1-201ENST00000398242 1049 ntBASIC21.44■■□□□ 1.02
CDKL5O76039 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.44■■□□□ 1.02
CDKL5O76039 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.44■■□□□ 1.02
CDKL5O76039 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.44■■□□□ 1.02
CDKL5O76039 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.44■■□□□ 1.02
CDKL5O76039 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CDKL5O76039 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CDKL5O76039 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDKL5O76039 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CDKL5O76039 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.44■■□□□ 1.02
CDKL5O76039 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.44■■□□□ 1.02
CDKL5O76039 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.44■■□□□ 1.02
CDKL5O76039 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.44■■□□□ 1.02
CDKL5O76039 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CDKL5O76039 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDKL5O76039 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.44■■□□□ 1.02
CDKL5O76039 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
CDKL5O76039 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.43■■□□□ 1.02
CDKL5O76039 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
CDKL5O76039 ECEL1P3-201ENST00000427961 737 ntBASIC21.43■■□□□ 1.02
CDKL5O76039 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.43■■□□□ 1.02
CDKL5O76039 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.43■■□□□ 1.02
CDKL5O76039 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.43■■□□□ 1.02
CDKL5O76039 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.43■■□□□ 1.02
CDKL5O76039 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
CDKL5O76039 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.43■■□□□ 1.02
CDKL5O76039 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.43■■□□□ 1.02
CDKL5O76039 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.43■■□□□ 1.02
CDKL5O76039 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 GMCL1P1-201ENST00000463439 1581 ntBASIC21.43■■□□□ 1.02
CDKL5O76039 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.43■■□□□ 1.02
CDKL5O76039 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.43■■□□□ 1.02
CDKL5O76039 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CDKL5O76039 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKL5O76039 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.42■■□□□ 1.02
CDKL5O76039 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.42■■□□□ 1.02
CDKL5O76039 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.42■■□□□ 1.02
CDKL5O76039 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.42■■□□□ 1.02
CDKL5O76039 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.42■■□□□ 1.02
CDKL5O76039 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.42■■□□□ 1.02
CDKL5O76039 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
CDKL5O76039 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.42■■□□□ 1.02
CDKL5O76039 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.42■■□□□ 1.02
CDKL5O76039 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.42■■□□□ 1.02
CDKL5O76039 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.42■■□□□ 1.02
CDKL5O76039 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CDKL5O76039 AC073912.3-201ENST00000624414 853 ntBASIC21.42■■□□□ 1.02
CDKL5O76039 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms