Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLPXO76031 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.77■□□□□ 0.27
CLPXO76031 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CLPXO76031 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPXO76031 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
CLPXO76031 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPXO76031 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.77■□□□□ 0.27
CLPXO76031 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPXO76031 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPXO76031 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.77■□□□□ 0.27
CLPXO76031 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.76■□□□□ 0.27
CLPXO76031 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CLPXO76031 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.76■□□□□ 0.27
CLPXO76031 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLPXO76031 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLPXO76031 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.76■□□□□ 0.27
CLPXO76031 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CLPXO76031 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 HLA-G-202ENST00000376815 851 ntBASIC16.76■□□□□ 0.27
CLPXO76031 HLA-G-203ENST00000376818 1127 ntBASIC16.76■□□□□ 0.27
CLPXO76031 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.76■□□□□ 0.27
CLPXO76031 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLPXO76031 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.76■□□□□ 0.27
CLPXO76031 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLPXO76031 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLPXO76031 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPXO76031 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLPXO76031 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.76■□□□□ 0.27
CLPXO76031 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.76■□□□□ 0.27
CLPXO76031 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.76■□□□□ 0.27
CLPXO76031 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
CLPXO76031 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLPXO76031 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.75■□□□□ 0.27
CLPXO76031 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CLPXO76031 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.75■□□□□ 0.27
CLPXO76031 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CLPXO76031 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLPXO76031 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.75■□□□□ 0.27
CLPXO76031 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.75■□□□□ 0.27
CLPXO76031 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.75■□□□□ 0.27
CLPXO76031 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CLPXO76031 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.75■□□□□ 0.27
CLPXO76031 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.75■□□□□ 0.27
CLPXO76031 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLPXO76031 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLPXO76031 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.75■□□□□ 0.27
CLPXO76031 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CLPXO76031 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLPXO76031 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.75■□□□□ 0.27
CLPXO76031 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
CLPXO76031 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPXO76031 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
CLPXO76031 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLPXO76031 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLPXO76031 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPXO76031 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPXO76031 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLPXO76031 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPXO76031 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CLPXO76031 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.74■□□□□ 0.27
CLPXO76031 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPXO76031 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.74■□□□□ 0.27
CLPXO76031 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.74■□□□□ 0.27
CLPXO76031 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.74■□□□□ 0.27
CLPXO76031 AC105036.2-201ENST00000569468 176 ntBASIC16.74■□□□□ 0.27
CLPXO76031 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPXO76031 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPXO76031 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPXO76031 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.74■□□□□ 0.27
CLPXO76031 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.74■□□□□ 0.27
CLPXO76031 PCDH8P1-201ENST00000428983 2773 ntBASIC16.74■□□□□ 0.27
CLPXO76031 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLPXO76031 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms