Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC083906.6-201ENST00000641366 219 ntBASIC18.51■□□□□ 0.55
GPC4O75487 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GPC4O75487 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GPC4O75487 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GPC4O75487 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.51■□□□□ 0.55
GPC4O75487 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GPC4O75487 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GPC4O75487 KRT8P32-201ENST00000512863 1461 ntBASIC18.51■□□□□ 0.55
GPC4O75487 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GPC4O75487 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GPC4O75487 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
GPC4O75487 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
GPC4O75487 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.5■□□□□ 0.55
GPC4O75487 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
GPC4O75487 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 AC005332.8-201ENST00000622750 2735 ntBASIC18.5■□□□□ 0.55
GPC4O75487 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.5■□□□□ 0.55
GPC4O75487 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.5■□□□□ 0.55
GPC4O75487 SLC25A1P2-201ENST00000430693 912 ntBASIC18.5■□□□□ 0.55
GPC4O75487 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.5■□□□□ 0.55
GPC4O75487 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GPC4O75487 AC008622.2-201ENST00000617006 1229 ntBASIC18.5■□□□□ 0.55
GPC4O75487 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GPC4O75487 CYP2D8P-201ENST00000433633 1490 ntBASIC18.5■□□□□ 0.55
GPC4O75487 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.5■□□□□ 0.55
GPC4O75487 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GPC4O75487 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GPC4O75487 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.49■□□□□ 0.55
GPC4O75487 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
GPC4O75487 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.49■□□□□ 0.55
GPC4O75487 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.49■□□□□ 0.55
GPC4O75487 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.49■□□□□ 0.55
GPC4O75487 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.49■□□□□ 0.55
GPC4O75487 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.49■□□□□ 0.55
GPC4O75487 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.49■□□□□ 0.55
GPC4O75487 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 BICD1-207ENST00000551848 1962 ntBASIC18.49■□□□□ 0.55
GPC4O75487 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.49■□□□□ 0.55
GPC4O75487 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.49■□□□□ 0.55
GPC4O75487 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GPC4O75487 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
GPC4O75487 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.48■□□□□ 0.55
GPC4O75487 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.48■□□□□ 0.55
GPC4O75487 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 TSPY14P-201ENST00000303979 915 ntBASIC18.48■□□□□ 0.55
GPC4O75487 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.48■□□□□ 0.55
GPC4O75487 C2orf69P3-201ENST00000565542 1120 ntBASIC18.48■□□□□ 0.55
GPC4O75487 AL353719.1-201ENST00000566847 864 ntBASIC18.48■□□□□ 0.55
GPC4O75487 AC010947.1-201ENST00000623454 693 ntBASIC18.48■□□□□ 0.55
GPC4O75487 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.48■□□□□ 0.55
GPC4O75487 AC068587.9-201ENST00000641814 219 ntBASIC18.48■□□□□ 0.55
GPC4O75487 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
GPC4O75487 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
GPC4O75487 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
GPC4O75487 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
GPC4O75487 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC4O75487 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC4O75487 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC4O75487 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC4O75487 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms