Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 NUDT16P1-203ENST00000513809 620 ntBASIC17.52■□□□□ 0.4
SCN2BO60939 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.52■□□□□ 0.4
SCN2BO60939 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.52■□□□□ 0.4
SCN2BO60939 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SCN2BO60939 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCN2BO60939 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SCN2BO60939 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SCN2BO60939 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SCN2BO60939 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SCN2BO60939 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.52■□□□□ 0.39
SCN2BO60939 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.52■□□□□ 0.39
SCN2BO60939 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
SCN2BO60939 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.51■□□□□ 0.39
SCN2BO60939 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.51■□□□□ 0.39
SCN2BO60939 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SCN2BO60939 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SCN2BO60939 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.51■□□□□ 0.39
SCN2BO60939 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SCN2BO60939 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.51■□□□□ 0.39
SCN2BO60939 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SCN2BO60939 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.51■□□□□ 0.39
SCN2BO60939 MFAP1P1-201ENST00000442257 1255 ntBASIC17.51■□□□□ 0.39
SCN2BO60939 AC098590.1-201ENST00000468126 897 ntBASIC17.51■□□□□ 0.39
SCN2BO60939 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.51■□□□□ 0.39
SCN2BO60939 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.51■□□□□ 0.39
SCN2BO60939 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.51■□□□□ 0.39
SCN2BO60939 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.51■□□□□ 0.39
SCN2BO60939 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN2BO60939 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
SCN2BO60939 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.5■□□□□ 0.39
SCN2BO60939 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SCN2BO60939 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCN2BO60939 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN2BO60939 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN2BO60939 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCN2BO60939 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SCN2BO60939 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SCN2BO60939 KRT8P50-201ENST00000562022 1438 ntBASIC17.5■□□□□ 0.39
SCN2BO60939 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SCN2BO60939 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN2BO60939 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCN2BO60939 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.5■□□□□ 0.39
SCN2BO60939 KRT18P29-201ENST00000397031 1267 ntBASIC17.5■□□□□ 0.39
SCN2BO60939 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.5■□□□□ 0.39
SCN2BO60939 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCN2BO60939 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.5■□□□□ 0.39
SCN2BO60939 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.5■□□□□ 0.39
SCN2BO60939 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.5■□□□□ 0.39
SCN2BO60939 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.5■□□□□ 0.39
SCN2BO60939 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.5■□□□□ 0.39
SCN2BO60939 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN2BO60939 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SCN2BO60939 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN2BO60939 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCN2BO60939 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN2BO60939 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SCN2BO60939 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SCN2BO60939 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SCN2BO60939 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.49■□□□□ 0.39
SCN2BO60939 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SCN2BO60939 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
SCN2BO60939 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.49■□□□□ 0.39
SCN2BO60939 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SCN2BO60939 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.49■□□□□ 0.39
SCN2BO60939 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 AP000593.1-201ENST00000393668 712 ntBASIC17.49■□□□□ 0.39
SCN2BO60939 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 RPS2P55-201ENST00000397318 883 ntBASIC17.49■□□□□ 0.39
SCN2BO60939 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.49■□□□□ 0.39
SCN2BO60939 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.49■□□□□ 0.39
SCN2BO60939 CA15P1-201ENST00000481698 905 ntBASIC17.49■□□□□ 0.39
SCN2BO60939 AC107956.1-201ENST00000494359 873 ntBASIC17.49■□□□□ 0.39
SCN2BO60939 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.49■□□□□ 0.39
SCN2BO60939 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.49■□□□□ 0.39
SCN2BO60939 AC113410.3-201ENST00000623366 203 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms