Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF11O60813 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF11O60813 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF11O60813 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF11O60813 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF11O60813 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF11O60813 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PRAMEF11O60813 MIR1224-201ENST00000408193 85 ntBASIC18.7■□□□□ 0.58
PRAMEF11O60813 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.7■□□□□ 0.58
PRAMEF11O60813 AL671277.2-201ENST00000458060 996 ntBASIC18.7■□□□□ 0.58
PRAMEF11O60813 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PRAMEF11O60813 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.7■□□□□ 0.58
PRAMEF11O60813 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.7■□□□□ 0.58
PRAMEF11O60813 AC010331.1-201ENST00000611423 582 ntBASIC18.7■□□□□ 0.58
PRAMEF11O60813 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.7■□□□□ 0.58
PRAMEF11O60813 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF11O60813 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PRAMEF11O60813 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.7■□□□□ 0.58
PRAMEF11O60813 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.7■□□□□ 0.58
PRAMEF11O60813 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF11O60813 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.7■□□□□ 0.58
PRAMEF11O60813 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PRAMEF11O60813 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF11O60813 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.7■□□□□ 0.58
PRAMEF11O60813 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF11O60813 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF11O60813 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF11O60813 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF11O60813 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PRAMEF11O60813 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF11O60813 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF11O60813 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF11O60813 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.69■□□□□ 0.58
PRAMEF11O60813 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF11O60813 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF11O60813 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF11O60813 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PRAMEF11O60813 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF11O60813 AC009113.1-201ENST00000570267 2443 ntBASIC18.69■□□□□ 0.58
PRAMEF11O60813 LINC01311-201ENST00000565162 1445 ntBASIC18.69■□□□□ 0.58
PRAMEF11O60813 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PRAMEF11O60813 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF11O60813 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.69■□□□□ 0.58
PRAMEF11O60813 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF11O60813 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.69■□□□□ 0.58
PRAMEF11O60813 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.69■□□□□ 0.58
PRAMEF11O60813 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.69■□□□□ 0.58
PRAMEF11O60813 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PRAMEF11O60813 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF11O60813 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF11O60813 AL024508.2-201ENST00000607749 1894 ntBASIC18.69■□□□□ 0.58
PRAMEF11O60813 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF11O60813 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF11O60813 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF11O60813 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF11O60813 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF11O60813 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF11O60813 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF11O60813 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF11O60813 AC104581.1-202ENST00000635932 2618 ntBASIC18.68■□□□□ 0.58
PRAMEF11O60813 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF11O60813 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF11O60813 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF11O60813 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 AC083849.1-201ENST00000615227 514 ntBASIC18.68■□□□□ 0.58
PRAMEF11O60813 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF11O60813 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF11O60813 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF11O60813 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF11O60813 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 GMCL1P1-201ENST00000463439 1581 ntBASIC18.68■□□□□ 0.58
PRAMEF11O60813 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PRAMEF11O60813 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
PRAMEF11O60813 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PRAMEF11O60813 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF11O60813 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF11O60813 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF11O60813 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF11O60813 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF11O60813 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.67■□□□□ 0.58
PRAMEF11O60813 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF11O60813 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEF11O60813 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF11O60813 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEF11O60813 AL031133.1-201ENST00000406807 723 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms