Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.06■□□□□ 0
SSSCA1O60232 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SSSCA1O60232 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.06■□□□□ 0
SSSCA1O60232 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SSSCA1O60232 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.06■□□□□ 0
SSSCA1O60232 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.06■□□□□ 0
SSSCA1O60232 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.06■□□□□ 0
SSSCA1O60232 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.06■□□□□ 0
SSSCA1O60232 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.06■□□□□ 0
SSSCA1O60232 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.06■□□□□ 0
SSSCA1O60232 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.06■□□□□ 0
SSSCA1O60232 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.06■□□□□ 0
SSSCA1O60232 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.06■□□□□ 0
SSSCA1O60232 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.06■□□□□ 0
SSSCA1O60232 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.06■□□□□ 0
SSSCA1O60232 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 AC080080.1-201ENST00000625121 2420 ntBASIC15.06■□□□□ 0
SSSCA1O60232 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.06■□□□□ 0
SSSCA1O60232 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.06■□□□□ 0
SSSCA1O60232 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SSSCA1O60232 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
SSSCA1O60232 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.06■□□□□ 0
SSSCA1O60232 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.06■□□□□ 0
SSSCA1O60232 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.06■□□□□ 0
SSSCA1O60232 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSSCA1O60232 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.06■□□□□ 0
SSSCA1O60232 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SSSCA1O60232 AL645608.8-201ENST00000606034 2086 ntBASIC15.05■□□□□ 0
SSSCA1O60232 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
SSSCA1O60232 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SSSCA1O60232 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SSSCA1O60232 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SSSCA1O60232 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SSSCA1O60232 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.05■□□□□ 0
SSSCA1O60232 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SSSCA1O60232 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SSSCA1O60232 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.05■□□□□ -0
SSSCA1O60232 DUSP5P2-201ENST00000426873 1033 ntBASIC15.05■□□□□ -0
SSSCA1O60232 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SSSCA1O60232 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.05■□□□□ -0
SSSCA1O60232 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
SSSCA1O60232 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.05■□□□□ -0
SSSCA1O60232 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.05■□□□□ -0
SSSCA1O60232 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.05■□□□□ -0
SSSCA1O60232 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.05■□□□□ -0
SSSCA1O60232 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.05■□□□□ -0
SSSCA1O60232 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.05■□□□□ -0
SSSCA1O60232 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SSSCA1O60232 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SSSCA1O60232 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SSSCA1O60232 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SSSCA1O60232 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SSSCA1O60232 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SSSCA1O60232 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.05■□□□□ -0
SSSCA1O60232 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
SSSCA1O60232 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.05■□□□□ -0
SSSCA1O60232 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SSSCA1O60232 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SSSCA1O60232 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SSSCA1O60232 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.04■□□□□ -0
SSSCA1O60232 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
SSSCA1O60232 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.04■□□□□ -0
SSSCA1O60232 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SSSCA1O60232 AC092368.3-202ENST00000574180 1591 ntBASIC15.04■□□□□ -0
SSSCA1O60232 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.04■□□□□ -0
SSSCA1O60232 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 KRT8P45-201ENST00000414328 1447 ntBASIC15.04■□□□□ -0
SSSCA1O60232 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.04■□□□□ -0
SSSCA1O60232 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
SSSCA1O60232 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.04■□□□□ -0
SSSCA1O60232 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SSSCA1O60232 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SSSCA1O60232 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms