Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.75■□□□□ 0.27
SSX4O60224 MIR6786-201ENST00000616843 113 ntBASIC16.75■□□□□ 0.27
SSX4O60224 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.75■□□□□ 0.27
SSX4O60224 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.75■□□□□ 0.27
SSX4O60224 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.75■□□□□ 0.27
SSX4O60224 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.74■□□□□ 0.27
SSX4O60224 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.74■□□□□ 0.27
SSX4O60224 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 KRT8P17-201ENST00000453110 1448 ntBASIC16.74■□□□□ 0.27
SSX4O60224 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.74■□□□□ 0.27
SSX4O60224 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.74■□□□□ 0.27
SSX4O60224 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.74■□□□□ 0.27
SSX4O60224 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.74■□□□□ 0.27
SSX4O60224 AP000525.1-201ENST00000608286 694 ntBASIC16.74■□□□□ 0.27
SSX4O60224 REXO1L10P-201ENST00000615707 1290 ntBASIC16.74■□□□□ 0.27
SSX4O60224 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.74■□□□□ 0.27
SSX4O60224 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SSX4O60224 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.74■□□□□ 0.27
SSX4O60224 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.74■□□□□ 0.27
SSX4O60224 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SSX4O60224 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX4O60224 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.74■□□□□ 0.27
SSX4O60224 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SSX4O60224 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SSX4O60224 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.73■□□□□ 0.27
SSX4O60224 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.73■□□□□ 0.27
SSX4O60224 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SSX4O60224 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SSX4O60224 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.73■□□□□ 0.27
SSX4O60224 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 MIR1238-201ENST00000408483 83 ntBASIC16.73■□□□□ 0.27
SSX4O60224 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SSX4O60224 RN7SL850P-201ENST00000579959 291 ntBASIC16.73■□□□□ 0.27
SSX4O60224 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SSX4O60224 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 AC011270.2-201ENST00000624293 2550 ntBASIC16.73■□□□□ 0.27
SSX4O60224 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX4O60224 AC073592.3-201ENST00000625118 1834 ntBASIC16.73■□□□□ 0.27
SSX4O60224 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
SSX4O60224 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX4O60224 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX4O60224 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX4O60224 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
SSX4O60224 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX4O60224 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SSX4O60224 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.72■□□□□ 0.27
SSX4O60224 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX4O60224 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
SSX4O60224 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX4O60224 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SSX4O60224 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX4O60224 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX4O60224 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX4O60224 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.72■□□□□ 0.27
SSX4O60224 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.72■□□□□ 0.27
SSX4O60224 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.72■□□□□ 0.27
SSX4O60224 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.72■□□□□ 0.27
SSX4O60224 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.72■□□□□ 0.27
SSX4O60224 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SSX4O60224 AC141586.5-201ENST00000624546 2050 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms