Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDE6DO43924 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PDE6DO43924 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PDE6DO43924 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDE6DO43924 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDE6DO43924 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDE6DO43924 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDE6DO43924 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.32□□□□□ -0.12
PDE6DO43924 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDE6DO43924 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.31□□□□□ -0.12
PDE6DO43924 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.31□□□□□ -0.12
PDE6DO43924 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
PDE6DO43924 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.31□□□□□ -0.12
PDE6DO43924 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.31□□□□□ -0.12
PDE6DO43924 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
PDE6DO43924 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.31□□□□□ -0.12
PDE6DO43924 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.31□□□□□ -0.12
PDE6DO43924 AC008694.1-202ENST00000636953 945 ntBASIC14.31□□□□□ -0.12
PDE6DO43924 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.31□□□□□ -0.12
PDE6DO43924 AC011270.2-201ENST00000624293 2550 ntBASIC14.31□□□□□ -0.12
PDE6DO43924 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 AP001094.4-201ENST00000579008 2176 ntBASIC14.31□□□□□ -0.12
PDE6DO43924 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.31□□□□□ -0.12
PDE6DO43924 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PDE6DO43924 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PDE6DO43924 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.31□□□□□ -0.12
PDE6DO43924 AC124283.5-201ENST00000624661 1809 ntBASIC14.31□□□□□ -0.12
PDE6DO43924 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
PDE6DO43924 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.31□□□□□ -0.12
PDE6DO43924 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
PDE6DO43924 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PDE6DO43924 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.31□□□□□ -0.12
PDE6DO43924 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PDE6DO43924 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
PDE6DO43924 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDE6DO43924 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PDE6DO43924 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.3□□□□□ -0.12
PDE6DO43924 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.3□□□□□ -0.12
PDE6DO43924 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PDE6DO43924 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.3□□□□□ -0.12
PDE6DO43924 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
PDE6DO43924 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PDE6DO43924 AC022211.2-201ENST00000585075 2527 ntBASIC14.3□□□□□ -0.12
PDE6DO43924 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.3□□□□□ -0.12
PDE6DO43924 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.3□□□□□ -0.12
PDE6DO43924 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.3□□□□□ -0.12
PDE6DO43924 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.3□□□□□ -0.12
PDE6DO43924 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.3□□□□□ -0.12
PDE6DO43924 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
PDE6DO43924 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.3□□□□□ -0.12
PDE6DO43924 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.3□□□□□ -0.12
PDE6DO43924 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.3□□□□□ -0.12
PDE6DO43924 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.3□□□□□ -0.12
PDE6DO43924 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms