Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.44■□□□□ 0.22
TRAF3IP2O43734 SEC1P-202ENST00000473944 940 ntBASIC16.44■□□□□ 0.22
TRAF3IP2O43734 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 AC010203.1-204ENST00000548782 407 ntBASIC16.44■□□□□ 0.22
TRAF3IP2O43734 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 AC141257.4-201ENST00000634557 245 ntBASIC16.44■□□□□ 0.22
TRAF3IP2O43734 AC136944.6-201ENST00000634818 245 ntBASIC16.44■□□□□ 0.22
TRAF3IP2O43734 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 BICD1-207ENST00000551848 1962 ntBASIC16.44■□□□□ 0.22
TRAF3IP2O43734 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP2O43734 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 AC113347.1-201ENST00000413321 391 ntBASIC16.43■□□□□ 0.22
TRAF3IP2O43734 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 AC010240.3-201ENST00000607688 395 ntBASIC16.43■□□□□ 0.22
TRAF3IP2O43734 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 AC135050.7-201ENST00000624508 2218 ntBASIC16.43■□□□□ 0.22
TRAF3IP2O43734 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP2O43734 AL162741.1-201ENST00000565563 1558 ntBASIC16.43■□□□□ 0.22
TRAF3IP2O43734 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 MIR149-201ENST00000384879 89 ntBASIC16.42■□□□□ 0.22
TRAF3IP2O43734 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 AC211429.1-201ENST00000415277 523 ntBASIC16.42■□□□□ 0.22
TRAF3IP2O43734 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms