Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
KDELR3O43731 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.69■□□□□ 0.58
KDELR3O43731 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.69■□□□□ 0.58
KDELR3O43731 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDELR3O43731 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDELR3O43731 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDELR3O43731 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.69■□□□□ 0.58
KDELR3O43731 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KDELR3O43731 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.69■□□□□ 0.58
KDELR3O43731 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.69■□□□□ 0.58
KDELR3O43731 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
KDELR3O43731 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDELR3O43731 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KDELR3O43731 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.68■□□□□ 0.58
KDELR3O43731 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
KDELR3O43731 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KDELR3O43731 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KDELR3O43731 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.68■□□□□ 0.58
KDELR3O43731 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.68■□□□□ 0.58
KDELR3O43731 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.68■□□□□ 0.58
KDELR3O43731 AC024563.2-201ENST00000603282 481 ntBASIC18.68■□□□□ 0.58
KDELR3O43731 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.68■□□□□ 0.58
KDELR3O43731 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KDELR3O43731 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
KDELR3O43731 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
KDELR3O43731 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.68■□□□□ 0.58
KDELR3O43731 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KDELR3O43731 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
KDELR3O43731 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDELR3O43731 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.67■□□□□ 0.58
KDELR3O43731 AL024508.2-201ENST00000607749 1894 ntBASIC18.67■□□□□ 0.58
KDELR3O43731 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.67■□□□□ 0.58
KDELR3O43731 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.67■□□□□ 0.58
KDELR3O43731 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDELR3O43731 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.67■□□□□ 0.58
KDELR3O43731 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KDELR3O43731 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDELR3O43731 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KDELR3O43731 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.67■□□□□ 0.58
KDELR3O43731 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDELR3O43731 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.67■□□□□ 0.58
KDELR3O43731 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.67■□□□□ 0.58
KDELR3O43731 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.67■□□□□ 0.58
KDELR3O43731 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KDELR3O43731 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KDELR3O43731 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
KDELR3O43731 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.67■□□□□ 0.58
KDELR3O43731 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.67■□□□□ 0.58
KDELR3O43731 AC005332.1-201ENST00000577698 1310 ntBASIC18.67■□□□□ 0.58
KDELR3O43731 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDELR3O43731 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDELR3O43731 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.67■□□□□ 0.58
KDELR3O43731 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KDELR3O43731 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.67■□□□□ 0.58
KDELR3O43731 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDELR3O43731 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
KDELR3O43731 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KDELR3O43731 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDELR3O43731 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KDELR3O43731 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDELR3O43731 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.66■□□□□ 0.58
KDELR3O43731 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDELR3O43731 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
KDELR3O43731 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDELR3O43731 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KDELR3O43731 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDELR3O43731 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
KDELR3O43731 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.66■□□□□ 0.58
KDELR3O43731 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.66■□□□□ 0.58
KDELR3O43731 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDELR3O43731 GMCL1P1-201ENST00000463439 1581 ntBASIC18.66■□□□□ 0.58
KDELR3O43731 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
KDELR3O43731 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDELR3O43731 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.66■□□□□ 0.58
KDELR3O43731 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
KDELR3O43731 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDELR3O43731 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.66■□□□□ 0.58
KDELR3O43731 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms