Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2AO43633 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.74■□□□□ 0.91
CHMP2AO43633 BX323043.1-201ENST00000641006 1765 ntBASIC20.74■□□□□ 0.91
CHMP2AO43633 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2AO43633 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.74■□□□□ 0.91
CHMP2AO43633 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.74■□□□□ 0.91
CHMP2AO43633 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.74■□□□□ 0.91
CHMP2AO43633 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2AO43633 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2AO43633 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2AO43633 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CHMP2AO43633 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.73■□□□□ 0.91
CHMP2AO43633 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2AO43633 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2AO43633 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2AO43633 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2AO43633 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2AO43633 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.73■□□□□ 0.91
CHMP2AO43633 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2AO43633 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.73■□□□□ 0.91
CHMP2AO43633 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.73■□□□□ 0.91
CHMP2AO43633 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHMP2AO43633 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2AO43633 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.73■□□□□ 0.91
CHMP2AO43633 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.73■□□□□ 0.91
CHMP2AO43633 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2AO43633 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.73■□□□□ 0.91
CHMP2AO43633 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2AO43633 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.72■□□□□ 0.91
CHMP2AO43633 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2AO43633 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2AO43633 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.72■□□□□ 0.91
CHMP2AO43633 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.72■□□□□ 0.91
CHMP2AO43633 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2AO43633 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.72■□□□□ 0.91
CHMP2AO43633 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.72■□□□□ 0.91
CHMP2AO43633 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.72■□□□□ 0.91
CHMP2AO43633 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.72■□□□□ 0.91
CHMP2AO43633 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2AO43633 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2AO43633 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.72■□□□□ 0.91
CHMP2AO43633 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2AO43633 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.72■□□□□ 0.91
CHMP2AO43633 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2AO43633 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2AO43633 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.72■□□□□ 0.91
CHMP2AO43633 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.72■□□□□ 0.91
CHMP2AO43633 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2AO43633 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2AO43633 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2AO43633 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2AO43633 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2AO43633 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHMP2AO43633 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2AO43633 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2AO43633 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.71■□□□□ 0.91
CHMP2AO43633 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2AO43633 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2AO43633 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP2AO43633 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP2AO43633 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.71■□□□□ 0.91
CHMP2AO43633 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.71■□□□□ 0.91
CHMP2AO43633 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2AO43633 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.71■□□□□ 0.91
CHMP2AO43633 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.71■□□□□ 0.91
CHMP2AO43633 AL136038.3-201ENST00000561909 1096 ntBASIC20.71■□□□□ 0.91
CHMP2AO43633 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP2AO43633 MIR3180-4-201ENST00000582223 153 ntBASIC20.71■□□□□ 0.91
CHMP2AO43633 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.71■□□□□ 0.91
CHMP2AO43633 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHMP2AO43633 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2AO43633 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2AO43633 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2AO43633 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.71■□□□□ 0.91
CHMP2AO43633 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHMP2AO43633 IER3-202ENST00000376377 1350 ntBASIC20.71■□□□□ 0.91
CHMP2AO43633 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP2AO43633 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CHMP2AO43633 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CHMP2AO43633 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP2AO43633 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP2AO43633 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
CHMP2AO43633 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP2AO43633 AL645929.1-201ENST00000420084 975 ntBASIC20.7■□□□□ 0.9
CHMP2AO43633 HLA-F-220ENST00000434407 884 ntBASIC20.7■□□□□ 0.9
CHMP2AO43633 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP2AO43633 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.7■□□□□ 0.9
CHMP2AO43633 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMP2AO43633 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP2AO43633 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP2AO43633 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP2AO43633 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP2AO43633 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP2AO43633 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CHMP2AO43633 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP2AO43633 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP2AO43633 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP2AO43633 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP2AO43633 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP2AO43633 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms