Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NTN3O00634 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NTN3O00634 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NTN3O00634 TP73-AS1-210ENST00000637775 1455 ntBASIC17.44■□□□□ 0.38
NTN3O00634 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.44■□□□□ 0.38
NTN3O00634 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NTN3O00634 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.44■□□□□ 0.38
NTN3O00634 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NTN3O00634 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.44■□□□□ 0.38
NTN3O00634 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NTN3O00634 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NTN3O00634 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NTN3O00634 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.44■□□□□ 0.38
NTN3O00634 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.44■□□□□ 0.38
NTN3O00634 PMS2P1-201ENST00000431037 1228 ntBASIC17.44■□□□□ 0.38
NTN3O00634 AC018712.1-201ENST00000455767 687 ntBASIC17.44■□□□□ 0.38
NTN3O00634 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NTN3O00634 AL355877.3-201ENST00000622820 899 ntBASIC17.44■□□□□ 0.38
NTN3O00634 AC148477.8-201ENST00000624298 468 ntBASIC17.44■□□□□ 0.38
NTN3O00634 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.44■□□□□ 0.38
NTN3O00634 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NTN3O00634 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NTN3O00634 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.44■□□□□ 0.38
NTN3O00634 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NTN3O00634 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NTN3O00634 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NTN3O00634 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.44■□□□□ 0.38
NTN3O00634 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.44■□□□□ 0.38
NTN3O00634 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NTN3O00634 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NTN3O00634 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NTN3O00634 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.44■□□□□ 0.38
NTN3O00634 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NTN3O00634 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NTN3O00634 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NTN3O00634 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.43■□□□□ 0.38
NTN3O00634 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NTN3O00634 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.43■□□□□ 0.38
NTN3O00634 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
NTN3O00634 MIR574-201ENST00000385209 96 ntBASIC17.43■□□□□ 0.38
NTN3O00634 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.43■□□□□ 0.38
NTN3O00634 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.43■□□□□ 0.38
NTN3O00634 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.43■□□□□ 0.38
NTN3O00634 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.43■□□□□ 0.38
NTN3O00634 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.43■□□□□ 0.38
NTN3O00634 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.43■□□□□ 0.38
NTN3O00634 AC009533.2-201ENST00000543664 586 ntBASIC17.43■□□□□ 0.38
NTN3O00634 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.43■□□□□ 0.38
NTN3O00634 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NTN3O00634 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.43■□□□□ 0.38
NTN3O00634 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.43■□□□□ 0.38
NTN3O00634 AC009154.2-201ENST00000621177 724 ntBASIC17.43■□□□□ 0.38
NTN3O00634 AC117500.6-201ENST00000624871 588 ntBASIC17.43■□□□□ 0.38
NTN3O00634 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 AL049812.1-201ENST00000432563 2267 ntBASIC17.43■□□□□ 0.38
NTN3O00634 AFG3L1P-217ENST00000557444 2447 ntBASIC17.43■□□□□ 0.38
NTN3O00634 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.43■□□□□ 0.38
NTN3O00634 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NTN3O00634 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.42■□□□□ 0.38
NTN3O00634 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NTN3O00634 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NTN3O00634 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.42■□□□□ 0.38
NTN3O00634 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NTN3O00634 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.42■□□□□ 0.38
NTN3O00634 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NTN3O00634 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NTN3O00634 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.42■□□□□ 0.38
NTN3O00634 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NTN3O00634 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NTN3O00634 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NTN3O00634 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.42■□□□□ 0.38
NTN3O00634 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
NTN3O00634 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NTN3O00634 RBM17P3-201ENST00000417687 1192 ntBASIC17.42■□□□□ 0.38
NTN3O00634 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NTN3O00634 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.42■□□□□ 0.38
NTN3O00634 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.42■□□□□ 0.38
NTN3O00634 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NTN3O00634 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.42■□□□□ 0.38
NTN3O00634 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.42■□□□□ 0.38
NTN3O00634 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.42■□□□□ 0.38
NTN3O00634 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.42■□□□□ 0.38
NTN3O00634 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NTN3O00634 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms