Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 AL358472.4-201ENST00000633140 710 ntBASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 AC005332.1-201ENST00000577698 1310 ntBASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
YJEFN3A6XGL0 AC104581.1-202ENST00000635932 2618 ntBASIC19.21■□□□□ 0.66
YJEFN3A6XGL0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 MIR662-201ENST00000384847 95 ntBASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.2■□□□□ 0.66
YJEFN3A6XGL0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YJEFN3A6XGL0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YJEFN3A6XGL0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
YJEFN3A6XGL0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.18■□□□□ 0.66
YJEFN3A6XGL0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YJEFN3A6XGL0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
YJEFN3A6XGL0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YJEFN3A6XGL0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.18■□□□□ 0.66
YJEFN3A6XGL0 AL024508.2-201ENST00000607749 1894 ntBASIC19.18■□□□□ 0.66
YJEFN3A6XGL0 AL020996.1-203ENST00000536896 2307 ntBASIC19.18■□□□□ 0.66
YJEFN3A6XGL0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YJEFN3A6XGL0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YJEFN3A6XGL0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YJEFN3A6XGL0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YJEFN3A6XGL0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms