Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 AC020763.4-201ENST00000623414 4170 ntBASIC14.55□□□□□ -0.08
LINC01548A6NM66 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 AP000593.1-201ENST00000393668 712 ntBASIC14.55□□□□□ -0.08
LINC01548A6NM66 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 AC083849.1-201ENST00000615227 514 ntBASIC14.55□□□□□ -0.08
LINC01548A6NM66 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01548A6NM66 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
LINC01548A6NM66 AL391807.1-203ENST00000604392 2365 ntBASIC14.54□□□□□ -0.08
LINC01548A6NM66 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LINC01548A6NM66 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC01548A6NM66 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 HBZP1-201ENST00000354915 429 ntBASIC14.54□□□□□ -0.08
LINC01548A6NM66 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 SPDYE13P-201ENST00000445314 798 ntBASIC14.54□□□□□ -0.08
LINC01548A6NM66 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC01548A6NM66 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC01548A6NM66 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC01548A6NM66 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.54□□□□□ -0.08
LINC01548A6NM66 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
LINC01548A6NM66 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC01548A6NM66 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LINC01548A6NM66 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01548A6NM66 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01548A6NM66 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC01548A6NM66 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01548A6NM66 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 SDHAP2-201ENST00000455183 2001 ntBASIC14.53□□□□□ -0.08
LINC01548A6NM66 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms