Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC53A6NM62 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.91■□□□□ 0.78
LRRC53A6NM62 MIR4674-201ENST00000582457 87 ntBASIC19.91■□□□□ 0.78
LRRC53A6NM62 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC53A6NM62 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
LRRC53A6NM62 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC53A6NM62 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC53A6NM62 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC53A6NM62 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LRRC53A6NM62 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC53A6NM62 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC53A6NM62 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC53A6NM62 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LRRC53A6NM62 AC134043.2-201ENST00000624206 2238 ntBASIC19.91■□□□□ 0.78
LRRC53A6NM62 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC53A6NM62 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC53A6NM62 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC53A6NM62 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC53A6NM62 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LRRC53A6NM62 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LRRC53A6NM62 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC53A6NM62 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC53A6NM62 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LRRC53A6NM62 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LRRC53A6NM62 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC53A6NM62 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC53A6NM62 AC142381.4-202ENST00000563973 229 ntBASIC19.9■□□□□ 0.78
LRRC53A6NM62 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.9■□□□□ 0.78
LRRC53A6NM62 AC113410.3-201ENST00000623366 203 ntBASIC19.9■□□□□ 0.78
LRRC53A6NM62 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC53A6NM62 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC53A6NM62 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
LRRC53A6NM62 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC53A6NM62 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
LRRC53A6NM62 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC53A6NM62 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC53A6NM62 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC53A6NM62 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC53A6NM62 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC53A6NM62 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LRRC53A6NM62 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LRRC53A6NM62 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC53A6NM62 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC53A6NM62 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC53A6NM62 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.89■□□□□ 0.78
LRRC53A6NM62 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
LRRC53A6NM62 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC53A6NM62 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC53A6NM62 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC53A6NM62 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC53A6NM62 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
LRRC53A6NM62 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC53A6NM62 RPS2P55-201ENST00000397318 883 ntBASIC19.89■□□□□ 0.77
LRRC53A6NM62 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC53A6NM62 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC53A6NM62 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRC53A6NM62 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LRRC53A6NM62 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LRRC53A6NM62 AC107956.1-201ENST00000494359 873 ntBASIC19.89■□□□□ 0.77
LRRC53A6NM62 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.89■□□□□ 0.77
LRRC53A6NM62 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.89■□□□□ 0.77
LRRC53A6NM62 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.89■□□□□ 0.77
LRRC53A6NM62 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRC53A6NM62 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.89■□□□□ 0.77
LRRC53A6NM62 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LRRC53A6NM62 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC53A6NM62 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
LRRC53A6NM62 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC53A6NM62 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LRRC53A6NM62 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC53A6NM62 AL096828.2-201ENST00000567259 1965 ntBASIC19.88■□□□□ 0.77
LRRC53A6NM62 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC53A6NM62 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC53A6NM62 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC53A6NM62 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC53A6NM62 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LRRC53A6NM62 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC53A6NM62 ABHD17AP1-201ENST00000358206 933 ntBASIC19.88■□□□□ 0.77
LRRC53A6NM62 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC53A6NM62 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.88■□□□□ 0.77
LRRC53A6NM62 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC53A6NM62 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.88■□□□□ 0.77
LRRC53A6NM62 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.88■□□□□ 0.77
LRRC53A6NM62 REXO1L10P-201ENST00000615707 1290 ntBASIC19.88■□□□□ 0.77
LRRC53A6NM62 REXO1L12P-201ENST00000622156 912 ntBASIC19.88■□□□□ 0.77
LRRC53A6NM62 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC53A6NM62 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRC53A6NM62 LTB4R2-202ENST00000528054 3092 ntBASIC19.88■□□□□ 0.77
LRRC53A6NM62 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC53A6NM62 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC53A6NM62 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC53A6NM62 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRC53A6NM62 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LRRC53A6NM62 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC53A6NM62 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
LRRC53A6NM62 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LRRC53A6NM62 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.87■□□□□ 0.77
LRRC53A6NM62 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC53A6NM62 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC53A6NM62 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms