Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 BICD1-207ENST00000551848 1962 ntBASIC18.48■□□□□ 0.55
CCDC189A1A4V9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.48■□□□□ 0.55
CCDC189A1A4V9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 AC128676.1-201ENST00000454392 318 ntBASIC18.48■□□□□ 0.55
CCDC189A1A4V9 AC091390.4-202ENST00000476426 537 ntBASIC18.48■□□□□ 0.55
CCDC189A1A4V9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 AC073195.1-201ENST00000607241 877 ntBASIC18.48■□□□□ 0.55
CCDC189A1A4V9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC189A1A4V9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 AL354751.1-201ENST00000412768 1863 ntBASIC18.47■□□□□ 0.55
CCDC189A1A4V9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
CCDC189A1A4V9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 MTMR9LP-203ENST00000426597 1545 ntBASIC18.46■□□□□ 0.55
CCDC189A1A4V9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms