Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC008764.6-201ENST00000595909 2069 ntBASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 AC133561.5-201ENST00000635547 218 ntBASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV5S1A1TA0A578 AC138028.4-201ENST00000564984 1845 ntBASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 AL133373.2-201ENST00000623187 2828 ntBASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 AC093010.1-201ENST00000473625 1624 ntBASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 AC009065.1-201ENST00000564055 1225 ntBASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 AC068880.1-201ENST00000507289 2297 ntBASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TCRBV5S1A1TA0A578 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 GCSHP2-201ENST00000560971 527 ntBASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV5S1A1TA0A578 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms