Protein–RNA interactions for Protein: A0A1B0GVG4

CCDC194, Coiled-coil domain-containing protein 194, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC194A0A1B0GVG4 AC099343.3-201ENST00000605834 2503 ntBASIC21.11■□□□□ 0.97
CCDC194A0A1B0GVG4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC194A0A1B0GVG4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC194A0A1B0GVG4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 RCN1P1-201ENST00000400413 996 ntBASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 MIR3180-4-201ENST00000582223 153 ntBASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC194A0A1B0GVG4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 AC117947.1-201ENST00000427448 529 ntBASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 YBX1P2-201ENST00000489612 999 ntBASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 RN7SL850P-201ENST00000579959 291 ntBASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC194A0A1B0GVG4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC194A0A1B0GVG4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC194A0A1B0GVG4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC194A0A1B0GVG4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC194A0A1B0GVG4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC194A0A1B0GVG4 MIR149-201ENST00000384879 89 ntBASIC21.08■□□□□ 0.97
CCDC194A0A1B0GVG4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC194A0A1B0GVG4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC194A0A1B0GVG4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC194A0A1B0GVG4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC194A0A1B0GVG4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC194A0A1B0GVG4 AL441883.1-201ENST00000566170 1045 ntBASIC21.08■□□□□ 0.97
CCDC194A0A1B0GVG4 AC011558.1-201ENST00000623459 338 ntBASIC21.08■□□□□ 0.97
CCDC194A0A1B0GVG4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC194A0A1B0GVG4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.96
CCDC194A0A1B0GVG4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC194A0A1B0GVG4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC194A0A1B0GVG4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
CCDC194A0A1B0GVG4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC194A0A1B0GVG4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC194A0A1B0GVG4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC194A0A1B0GVG4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC194A0A1B0GVG4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC194A0A1B0GVG4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
CCDC194A0A1B0GVG4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC194A0A1B0GVG4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC194A0A1B0GVG4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC194A0A1B0GVG4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
CCDC194A0A1B0GVG4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CCDC194A0A1B0GVG4 AC009102.3-201ENST00000623118 1491 ntBASIC21.07■□□□□ 0.96
CCDC194A0A1B0GVG4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC194A0A1B0GVG4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC194A0A1B0GVG4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC194A0A1B0GVG4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms