Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 AC106820.2-201ENST00000563775 3264 ntBASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 NIFKP9-201ENST00000419265 221 ntBASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 CD99P1-205ENST00000527459 561 ntBASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 AC131212.4-201ENST00000623606 975 ntBASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF103-CHMP3A0A140T963 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 OR6D1P-203ENST00000641209 4860 ntBASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 AC128676.1-201ENST00000454392 318 ntBASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 AP002982.1-201ENST00000492365 877 ntBASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 CROCCP1-201ENST00000426910 5675 ntBASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms