Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 MIR149-201ENST00000384879 89 ntBASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC099343.3-201ENST00000605834 2503 ntBASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 AL359736.2-201ENST00000621992 437 ntBASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC009102.3-201ENST00000623118 1491 ntBASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC012317.2-201ENST00000623305 2251 ntBASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRBV5-3A0A0A0MS03 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 CD177P1-201ENST00000606252 935 ntBASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-3A0A0A0MS03 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 HOXB1-202ENST00000577092 1414 ntBASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 SIRPAP1-201ENST00000448467 1770 ntBASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-3A0A0A0MS03 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 KRT18P55-202ENST00000578578 1546 ntBASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms