Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 HLA-B-256ENST00000639848 1089 ntBASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 KRT8P41-201ENST00000533985 1514 ntBASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV18A0A075B6X5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 PNMA6B-201ENST00000538162 1200 ntBASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 AC092118.2-201ENST00000613495 667 ntBASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV18A0A075B6X5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 FLJ13224-201ENST00000313737 1514 ntBASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 AL645608.8-201ENST00000606034 2086 ntBASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV18A0A075B6X5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV18A0A075B6X5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV18A0A075B6X5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAV18A0A075B6X5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV18A0A075B6X5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV18A0A075B6X5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
TRAV18A0A075B6X5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV18A0A075B6X5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAV18A0A075B6X5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV18A0A075B6X5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV18A0A075B6X5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV18A0A075B6X5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAV18A0A075B6X5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAV18A0A075B6X5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms