Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
BIVM-ERCC5R4GMW8 AL049812.1-201ENST00000432563 2267 ntBASIC30.71■■■□□ 2.51
BIVM-ERCC5R4GMW8 PAN3-AS1-201ENST00000563843 1351 ntBASIC30.7■■■□□ 2.51
BIVM-ERCC5R4GMW8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
BIVM-ERCC5R4GMW8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC30.7■■■□□ 2.51
BIVM-ERCC5R4GMW8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
BIVM-ERCC5R4GMW8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC30.7■■■□□ 2.51
BIVM-ERCC5R4GMW8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
BIVM-ERCC5R4GMW8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
BIVM-ERCC5R4GMW8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
BIVM-ERCC5R4GMW8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC30.7■■■□□ 2.5
BIVM-ERCC5R4GMW8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
BIVM-ERCC5R4GMW8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 AC093484.2-201ENST00000580996 2166 ntBASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 SART3-203ENST00000546611 1184 ntBASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
BIVM-ERCC5R4GMW8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
BIVM-ERCC5R4GMW8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
BIVM-ERCC5R4GMW8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
BIVM-ERCC5R4GMW8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
BIVM-ERCC5R4GMW8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
BIVM-ERCC5R4GMW8 HIST2H3DP1-201ENST00000401004 416 ntBASIC30.68■■■□□ 2.5
BIVM-ERCC5R4GMW8 AC125634.1-201ENST00000438758 1403 ntBASIC30.68■■■□□ 2.5
BIVM-ERCC5R4GMW8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC30.68■■■□□ 2.5
BIVM-ERCC5R4GMW8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC30.68■■■□□ 2.5
BIVM-ERCC5R4GMW8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
BIVM-ERCC5R4GMW8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
BIVM-ERCC5R4GMW8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
BIVM-ERCC5R4GMW8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 POLD2P1-201ENST00000511220 997 ntBASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
BIVM-ERCC5R4GMW8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
BIVM-ERCC5R4GMW8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
BIVM-ERCC5R4GMW8 AC068472.1-201ENST00000474589 881 ntBASIC30.66■■■□□ 2.5
BIVM-ERCC5R4GMW8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC30.66■■■□□ 2.5
BIVM-ERCC5R4GMW8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC30.66■■■□□ 2.5
BIVM-ERCC5R4GMW8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
BIVM-ERCC5R4GMW8 FAM215A-202ENST00000632077 792 ntBASIC30.66■■■□□ 2.5
BIVM-ERCC5R4GMW8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
BIVM-ERCC5R4GMW8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC30.66■■■□□ 2.5
BIVM-ERCC5R4GMW8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
BIVM-ERCC5R4GMW8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
BIVM-ERCC5R4GMW8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
BIVM-ERCC5R4GMW8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
BIVM-ERCC5R4GMW8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC30.66■■■□□ 2.5
BIVM-ERCC5R4GMW8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
BIVM-ERCC5R4GMW8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
BIVM-ERCC5R4GMW8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC30.64■■■□□ 2.5
BIVM-ERCC5R4GMW8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC30.64■■■□□ 2.5
BIVM-ERCC5R4GMW8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC30.64■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms