Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 AC092338.2-201ENST00000568827 1415 ntBASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CYP46A1Q9Y6A2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 AC138932.1-201ENST00000534164 6830 ntBASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 BX088651.1-201ENST00000540551 451 ntBASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 AC116562.4-202ENST00000641738 218 ntBASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.91■■□□□ 1.1
CYP46A1Q9Y6A2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 C2orf69P3-201ENST00000565542 1120 ntBASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 CR769767.2-201ENST00000622735 460 ntBASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CYP46A1Q9Y6A2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CYP46A1Q9Y6A2 HOXB1-202ENST00000577092 1414 ntBASIC21.89■■□□□ 1.1
CYP46A1Q9Y6A2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.89■■□□□ 1.1
CYP46A1Q9Y6A2 AL133373.2-201ENST00000623187 2828 ntBASIC21.89■■□□□ 1.1
CYP46A1Q9Y6A2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
CYP46A1Q9Y6A2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.89■■□□□ 1.1
CYP46A1Q9Y6A2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CYP46A1Q9Y6A2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.09
CYP46A1Q9Y6A2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
CYP46A1Q9Y6A2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CYP46A1Q9Y6A2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.89■■□□□ 1.09
CYP46A1Q9Y6A2 AC007663.1-201ENST00000438948 1240 ntBASIC21.89■■□□□ 1.09
CYP46A1Q9Y6A2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.89■■□□□ 1.09
CYP46A1Q9Y6A2 WWOX-216ENST00000569818 525 ntBASIC21.89■■□□□ 1.09
CYP46A1Q9Y6A2 MIR4497-201ENST00000583208 89 ntBASIC21.89■■□□□ 1.09
CYP46A1Q9Y6A2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CYP46A1Q9Y6A2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms