Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 MIR718-201ENST00000390190 70 ntBASIC21.1■□□□□ 0.97
CLIC4Q9Y696 AP000593.1-201ENST00000393668 712 ntBASIC21.1■□□□□ 0.97
CLIC4Q9Y696 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 AL355075.4-201ENST00000554988 638 ntBASIC21.1■□□□□ 0.97
CLIC4Q9Y696 FITM1-202ENST00000559294 800 ntBASIC21.1■□□□□ 0.97
CLIC4Q9Y696 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC4Q9Y696 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 MIR4785-201ENST00000585005 73 ntBASIC21.09■□□□□ 0.97
CLIC4Q9Y696 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC4Q9Y696 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 MIR1238-201ENST00000408483 83 ntBASIC21.08■□□□□ 0.97
CLIC4Q9Y696 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 SLC25A1P2-201ENST00000430693 912 ntBASIC21.08■□□□□ 0.97
CLIC4Q9Y696 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLIC4Q9Y696 AC092338.2-201ENST00000568827 1415 ntBASIC21.08■□□□□ 0.97
CLIC4Q9Y696 CR769767.2-201ENST00000622735 460 ntBASIC21.08■□□□□ 0.97
CLIC4Q9Y696 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CLIC4Q9Y696 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLIC4Q9Y696 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLIC4Q9Y696 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CLIC4Q9Y696 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CLIC4Q9Y696 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 SDHAP2-201ENST00000455183 2001 ntBASIC21.07■□□□□ 0.96
CLIC4Q9Y696 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 INGX-201ENST00000359239 846 ntBASIC21.07■□□□□ 0.96
CLIC4Q9Y696 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC4Q9Y696 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms