Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC2Q9Y5Z7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.29■□□□□ 0.68
HCFC2Q9Y5Z7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 KRT18P41-201ENST00000518924 1277 ntBASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC2Q9Y5Z7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 MTMR9LP-203ENST00000426597 1545 ntBASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 RCN1P2-201ENST00000398357 915 ntBASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 AC139887.3-201ENST00000568585 713 ntBASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 AL355877.3-201ENST00000622820 899 ntBASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.27■□□□□ 0.68
HCFC2Q9Y5Z7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
HCFC2Q9Y5Z7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HCFC2Q9Y5Z7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HCFC2Q9Y5Z7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.67
HCFC2Q9Y5Z7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 MIR1233-2-201ENST00000408138 82 ntBASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 MIR1233-1-201ENST00000408722 82 ntBASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 AC073648.2-201ENST00000510116 352 ntBASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 AC005336.2-201ENST00000593183 939 ntBASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HCFC2Q9Y5Z7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
HCFC2Q9Y5Z7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC2Q9Y5Z7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.25■□□□□ 0.67
HCFC2Q9Y5Z7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC2Q9Y5Z7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC2Q9Y5Z7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC2Q9Y5Z7 TP73-AS1-210ENST00000637775 1455 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms