Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 LINC00602-201ENST00000629776 2065 ntBASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 DOC2GP-204ENST00000639052 2548 ntBASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 AC104417.2-201ENST00000562989 1793 ntBASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAPPC1Q9Y5R8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 IGHV3-19-201ENST00000521488 291 ntBASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 AC008741.2-201ENST00000612792 3115 ntBASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC1Q9Y5R8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 FLJ13224-201ENST00000313737 1514 ntBASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 AC126755.1-201ENST00000525846 6405 ntBASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 ABHD17AP5-201ENST00000580133 923 ntBASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 AC126544.1-201ENST00000580842 1059 ntBASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 AC243732.1-201ENST00000612648 864 ntBASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms