Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 AC020916.1-201ENST00000587762 1774 ntBASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 RPS2P55-201ENST00000397318 883 ntBASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 AC107956.1-201ENST00000494359 873 ntBASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 LTB4R2-202ENST00000528054 3092 ntBASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 GMCL1P1-201ENST00000463439 1581 ntBASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA3Q9Y5H8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 TSPY20P-201ENST00000450910 630 ntBASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 FLJ13224-201ENST00000313737 1514 ntBASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCDHA3Q9Y5H8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 PRORSD1P-201ENST00000295112 541 ntBASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 ABHD17AP1-201ENST00000358206 933 ntBASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 AC134043.2-201ENST00000624206 2238 ntBASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHA3Q9Y5H8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 AL096828.2-201ENST00000567259 1965 ntBASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 AC142381.4-202ENST00000563973 229 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms