Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 LTB4R2-202ENST00000528054 3092 ntBASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB3Q9Y5E6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PCDHB3Q9Y5E6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB3Q9Y5E6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHB3Q9Y5E6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHB3Q9Y5E6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB3Q9Y5E6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
PCDHB3Q9Y5E6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHB3Q9Y5E6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PCDHB3Q9Y5E6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHB3Q9Y5E6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB3Q9Y5E6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 TSPY23P-201ENST00000440136 739 ntBASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 FEM1AP3-201ENST00000403722 1741 ntBASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 AL133373.2-201ENST00000623187 2828 ntBASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB3Q9Y5E6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 HOMER2P1-201ENST00000455653 964 ntBASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB3Q9Y5E6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms