Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF6Q9Y252 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RNF6Q9Y252 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF6Q9Y252 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF6Q9Y252 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF6Q9Y252 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF6Q9Y252 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF6Q9Y252 B3GAT3P1-201ENST00000471720 806 ntBASIC17.41■□□□□ 0.38
RNF6Q9Y252 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF6Q9Y252 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF6Q9Y252 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF6Q9Y252 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RNF6Q9Y252 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RNF6Q9Y252 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF6Q9Y252 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF6Q9Y252 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF6Q9Y252 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF6Q9Y252 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 TUBB8P6-201ENST00000436895 1288 ntBASIC17.4■□□□□ 0.38
RNF6Q9Y252 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 KRT18P16-201ENST00000510337 1294 ntBASIC17.4■□□□□ 0.38
RNF6Q9Y252 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 AP005242.2-201ENST00000580065 1175 ntBASIC17.4■□□□□ 0.38
RNF6Q9Y252 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 DGCR10-201ENST00000609839 495 ntBASIC17.4■□□□□ 0.38
RNF6Q9Y252 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF6Q9Y252 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF6Q9Y252 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
RNF6Q9Y252 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF6Q9Y252 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RNF6Q9Y252 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF6Q9Y252 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF6Q9Y252 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RNF6Q9Y252 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RNF6Q9Y252 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 FEM1AP3-201ENST00000403722 1741 ntBASIC17.39■□□□□ 0.37
RNF6Q9Y252 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RNF6Q9Y252 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF6Q9Y252 LIN28AP1-201ENST00000429574 405 ntBASIC17.39■□□□□ 0.37
RNF6Q9Y252 AC011506.1-201ENST00000474329 610 ntBASIC17.39■□□□□ 0.37
RNF6Q9Y252 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF6Q9Y252 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
RNF6Q9Y252 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF6Q9Y252 AC131212.4-201ENST00000623606 975 ntBASIC17.39■□□□□ 0.37
RNF6Q9Y252 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF6Q9Y252 AC083906.6-201ENST00000641366 219 ntBASIC17.39■□□□□ 0.37
RNF6Q9Y252 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF6Q9Y252 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF6Q9Y252 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF6Q9Y252 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RNF6Q9Y252 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF6Q9Y252 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms